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Primary Production

Primary Production

Primary Production is the production of organic compounds from carbon dioxide and sunlight, principally through the process of photosynthesis, forming the basis of the food web.

CMap

Algae are aquatic, photosynthetic plant-like organisms and include calcareous macroalgae, fleshy macroalgae, turf algae, and crustose coralline algae. Carbon storage and cycling is the ability of an ecosystem to utilize, process, and store carbon. Climate regulation is the process by which ecosystems process and store carbon, which can modulate atmospheric levels of carbon dioxide. Contact Uses, such as biological additions, physical damage, and biological harvesting, are activities in which humans create pressures through direct contact with the ecosystem. Cultural services are the nonmaterial benefits people obtain from ecosystems through spiritual enrichment, cognitive development, recreational opportunities, aesthetic experiences, sense of place, and educational and research opportunities. Discharges are the intentional or unintentional distribution of chemicals, debris, or other pollution, into the environment as a consequence of human activities. Ecosystem monitoring and restoration refers to responses to directly alter the condition of the reef ecosystem through restoration or remediation activities, setting limits on degradation through biological criteria or water quality criteria, or improving knowledge through monitoring, mapping, and scientific research. Ecosystem services are the benefits people obtain from ecosystems . Landscape Changes are alterations of the natural landscape through human activities, including coastal development, shoreline armoring, impervious surfaces, deforestation, or soil disturbance, which can alter water flow patterns and lead to pollutant runoff into coastal systems. Light is the level of visible and ultraviolet solar radiation that penetrates the water column. Mangroves are various kinds of trees up to medium height and shrubs that grow in saline coastal sediment habitats in the tropics and subtropics � mainly between latitudes 25� N and 25� S. Nutrients are essential elements needed by plants and animals for growth and primarily include nitrogen, phosphorous, and potassium, as well as minor nutrients such as calcium, magnesium, or zinc. The Reef Ecosystem includes a suite of abiotic variables that form the physical and chemical environment. Plankton are any plants or animals that are too small to actively move against ocean currents. Pressures are human activities that create stress on the environment. Primary Production is the production of organic compounds from carbon dioxide and sunlight, principally through the process of photosynthesis, forming the basis of the food web. Provisioning services are the products or ecosystem goods obtained from ecosystems, including seafood, genetic and biochemical resources, pharmaceuticals, ornamental resources, and water resources. The state of the Reef Ecosystem is the condition, in terms of quantity and quality, of the abiotic and biotic components including physical, chemical, and biological variables. Reef Habitat is the abundance, distribution, and condition of the benthic components of the reef ecosystem. Reef Inhabitants are all of the motile components of the reef ecosystem, including fish, invertebrates, marine reptiles and mammals, and are quantified by their abundance, distribution, and condition. Reef Life is the abundance, distribution, and condition of the biological components of the coral reef ecosystem. Regulating Services are benefits obtained from ecosystem processes that regulate the environment, including erosion regulation, natural hazard regulation, and climate regulation. Responses are actions taken by groups or individuals in society and government to prevent, compensate, ameliorate or adapt to changes in Ecosystem Services or their perceived value. Seagrasses are flowering plants that grow in marine, fully-saline environments. Socio-Economic Drivers include the sectors that fulfill human needs for Food & Raw Materials, Water, Shelter, Health, Culture, and Security, and the Infrastructure that supports the sectors. Supporting services are ecological processes that indirectly benefit humans by maintaining a functional ecosystem for the production of other ecosystem goods and services. Valuation is the process of estimating the worth, merit, or desirability of benefits derived from ecosystems. A wetland is an area of land whose soil is saturated with moisture either permanently or seasonally.

CMap Description

Algae and wetland plants, including seagrasses and mangroves, obtain nutrients through primary production. Stony coral also obtain nutrients through symbiotic algae called zooxanthellae. Primary production forms the foundation of the aquatic food web, providing complex habitat and resources for invertebrates and fish, which ultimately benefits humans through provision of goods, such as seafood, and recreational opportunities. Because photosynthesis converts atmospheric CO2 into biomass, primary production also contributes to climate regulation. Many of the same economic sectors that benefit from primary production also create pressures on the reef through harvesting, as well as contributing to coastal development and pollution. Decision-makers can better understand the value of reef primary productivity through valuation methods. Scientific monitoring and research can be used to better understand rates of primary production under various environmental conditions.

Citations

Citation Year Study Location Study Type Database Topics
Ahmad, SM; Padmakumari, VM; Raza, W; Venkatesham, K; Suseela, G; Sagar, N; Chamoli, A; Rajan, RS. 2011. High-resolution carbon and oxygen isotope records from a scleractinian (Porites) coral of Lakshadweep Archipelago. Quaternary International 238:107-114. 2011 US Pacific & Hawaii; India Climate; Primary Production; Stony Coral; Surface & Groundwater Flow
Al Balushi, SAK; Macquaker, JHS. 2011. Sedimentological evidence for bottom-water oxygenation during deposition of the Natih-B Member intrashelf-basinal sediments: Upper Cretaceous carbonate source rock, Natih Formation, North Sultanate of Oman. GeoArabia 16:47-84. 2011 Global; Oman Field Study & Monitoring; Model Echinoderms; Plankton; Primary Production; Sediment; Water Depth & Sea Level
Allison, N; Cohen, I; Finch, AA; Erez, J. 2011. Controls on Sr/Ca and Mg/Ca in scleractinian corals: The effects of Ca-ATPase and transcellular Ca channels on skeletal chemistry. Geochimica et Cosmochimica Acta 75:6350-6360. 2011 Calcium Carbonate Deposition; Primary Production; Stony Coral
Anthony, KRN; Kleypas, JA; Gattuso, JP. 2011. Coral reefs modify their seawater carbon chemistry - implications for impacts of ocean acidification. Global Change Biology 17:3655-3666. 2011 Australia Review; Model Algae; Calcium Carbonate Deposition; CO2; Ocean Acidity; Primary Production; Stony Coral; Surface & Groundwater Flow
Baker, DM; Kim, K; Andras, JP; Sparks, JP. 2011. Light-mediated (15)N fractionation in Caribbean gorgonian octocorals: implications for pollution monitoring. Coral Reefs 30:709-717. 2011 South & Central America; Florida; Caribbean Field Study & Monitoring; Lab Study Algae; Environmental Monitoring, Mapping, & Scientific Research; Nutrients; Octocoral; Primary Production; Stony Coral; Zooxanthellae
Bannister, RJ; Hoogenboom, MO; Anthony, KRN; Battershill, CN; Whalan, S; Webster, NS; de Nys, R. 2011. Incongruence between the distribution of a common coral reef sponge and photosynthesis. Marine Ecology Progress Series 423:95-100. 2011 Australia Complex Habitat & Resources; Cyanobacteria; Light; Microorganisms; Nutrients; Primary Production; Sponges
Beaufort, L; Probert, I; de Garidel-Thoron, T; Bendif, EM; Ruiz-Pino, D; Metzl, N; Goyet, C; Buchet, N; Coupel, P; Grelaud, M; Rost, B; Rickaby, REM; de Vargas, C. 2011. Sensitivity of coccolithophores to carbonate chemistry and ocean acidification. Nature 476:80-83. 2011 CO2; Ocean Acidity; Plankton; Primary Production
Behrendt, L; Larkum, AWD; Norman, A; Qvortrup, K; Chen, M; Ralph, P; Sorensen, SJ; Trampe, E; Kuhl, M. 2011. Endolithic chlorophyll d-containing phototrophs. ISME Journal 5:1072-1076. 2011 Algae; Coralline Algae; Cyanobacteria; Docks & Marinas; Microorganisms; Primary Production
Bertucci, A; Innocenti, A; Scozzafava, A; Tambutte, S; Zoccola, D; Supuran, CT. 2011. Carbonic anhydrase inhibitors. Inhibition studies with anions and sulfonamides of a new cytosolic enzyme from the scleractinian coral Stylophora pistillata. Bioorganic & Medicinal Chemistry Letters 21:710-714. 2011 Primary Production; Stony Coral
Bertucci, A; Tambutte, S; Supuran, CT; Allemand, D; Zoccola, D. 2011. A New Coral Carbonic Anhydrase in Stylophora pistillata. Marine Biotechnology 13:992-1002. 2011 Anemones & Zooanthids; Calcium Carbonate Deposition; Primary Production; Special Use Permitting; Stony Coral
Brading, P; Warner, ME; Davey, P; Smith, DJ; Achterberg, EP; Suggett, DJ. 2011. Differential effects of ocean acidification on growth and photosynthesis among phylotypes of Symbiodinium (Dinophyceae). Limnology and Oceanography 56:927-938. 2011 Model CO2; Ocean Acidity; Plankton; Primary Production
Chauvin, A; Denis, V; Cuet, P. 2011. Is the response of coral calcification to seawater acidification related to nutrient loading? Coral Reefs 30:911-923. 2011 Indian Ocean; Cuba; India Calcium Carbonate Deposition; CO2; Discharges; Nutrients; Ocean Acidity; Primary Production; Stony Coral; Surface & Groundwater Flow; Zooxanthellae
Coma, R; Serrano, E; Linares, C; Ribes, M; Diaz, D; Ballesteros, E. 2011. Sea Urchins Predation Facilitates Coral Invasion in a Marine Reserve. PLoS One 6. 2011 Algae; Invasive Species; Primary Production; Sea Urchins; Surface & Groundwater Flow
Cooper, TF; Ulstrup, KE; Dandan, SS; Heyward, AJ; Kuhl, M; Muirhead, A; O'Leary, RA; Ziersen, BEF; Van Oppen, MJH. 2011. Niche specialization of reef-building corals in the mesophotic zone: metabolic trade-offs between divergent Symbiodinium types. Proceedings of the Royal Society B 278:1840-1850. 2011 Australia Climate; Primary Production; Stony Coral; Zooxanthellae
Cuet, P; Atkinson, MJ; Blanchot, J; Casareto, BE; Cordier, E; Falter, J; Frouin, P; Fujimura, H; Pierret, C; Susuki, Y; Tourrand, C. 2011. CNP budgets of a coral-dominated fringing reef at La Reunion, France: coupling of oceanic phosphate and groundwater nitrate. Coral Reefs 30:45-55. 2011 Australia; Reunion; France Nutrients; Plankton; Primary Production; Surface & Groundwater Flow
de Putron, SJ; McCorkle, DC; Cohen, AL; Dillon, AB. 2011. The impact of seawater saturation state and bicarbonate ion concentration on calcification by new recruits of two Atlantic corals. Coral Reefs 30:321-328. 2011 US East Coast (NC, SC, GA) Calcium Carbonate Deposition; CO2; Ocean Acidity; Primary Production; Stony Coral
del Hoyo, A; Alvarez, R; del Campo, EM; Gasulla, F; Barreno, E; Casano, LM. 2011. Oxidative stress induces distinct physiological responses in the two Trebouxia phycobionts of the lichen Ramalina farinacea. Annals of Botany 107:109-118. 2011 Algae; Primary Production
Eynaud, Y; Nisbet, RM; Muller, EB. 2011. Impact of excess and harmful radiation on energy budgets in scleractinian corals. Ecological Modelling 222:1315-1322. 2011 Model Light; Nutrients; Primary Production; Stony Coral
Falter, JL; Atkinson, MJ; Schar, DW; Lowe, RJ; Monismith, SG. 2011. Short-term coherency between gross primary production and community respiration in an algal-dominated reef flat. Coral Reefs 30:53-58. 2011 US Pacific & Hawaii CO2; Nutrients; Primary Production; Sediment
Faxneld, S., T. Lund J�rgensen, N. D. Nguyen, M. Nystr�m, and M. Tedengren. 2011. Differences in physiological response to increased seawater temperature in nearshore and offshore corals in northern Vietnam. Marine Environmental Research 71:225-233. 2011 Vietnam Primary Production; Sediment; Stony Coral
Faxneld, S; Jorgensen, TL; Nguyen, ND; Nystrom, M; Tedengren, M. 2011. Differences in physiological response to increased seawater temperature in nearshore and offshore corals in northern Vietnam. Marine Environmental Research 71:225-233. 2011 Vietnam Climate; Primary Production; Salinity; Sediment; Stony Coral
Fukuda, S; Suzuki, I; Hama, T; Shiraiwa, Y. 2011. Compensatory response of the unicellular-calcifying alga Emiliania huxleyi (Coccolithophoridales, Haptophyta) to ocean acidification. Journal of Oceanography 67:17-25. 2011 Cuba Algae; CO2; Ocean Acidity; Plankton; Primary Production; Special Use Permitting
Godinot, C; Houlbreque, F; Grover, R; Ferrier-Pages, C. 2011. Coral Uptake of Inorganic Phosphorus and Nitrogen Negatively Affected by Simultaneous Changes in Temperature and pH. PLoS One 6. 2011 Cuba Climate; CO2; Nutrients; Ocean Acidity; Primary Production; Stony Coral; Zooxanthellae
Gopinath, A; Muraleedharan, NS; Chandramohanakumar, N; Jayalakshmi, KV. 2011. Statistical Significance of BioMonitoring of Marine Algae for Trace Metal Levels in a Coral Environment. Environmental Forensics 12:98-105. 2011 Field Study & Monitoring; Index or Indicator Agriculture; Algae; Environmental Monitoring, Mapping, & Scientific Research; Primary Production
Haas, AF; Nelson, CE; Kelly, LW; Carlson, CA; Rohwer, F; Leichter, JJ; Wyatt, A; Smith, JE. 2011. Effects of Coral Reef Benthic Primary Producers on Dissolved Organic Carbon and Microbial Activity. PLoS One 6. 2011 Australia; Cuba Algae; Calcareous Macroalgae; Complex Habitat & Resources; Coralline Algae; Microorganisms; Nutrients; Pathogens; Plankton; Primary Production; Stony Coral; Turf Algae
Hurd, CL; Cornwall, CE; Currie, K; Hepburn, CD; McGraw, CM; Hunter, KA; Boyd, PW. 2011. Metabolically induced pH fluctuations by some coastal calcifiers exceed projected 22nd century ocean acidification: a mechanism for differential susceptibility? Global Change Biology 17:3254-3262. 2011 Global Algae; CO2; Coralline Algae; Ocean Acidity; Primary Production; Sea Urchins; Surface & Groundwater Flow
Inoue, M; Suwa, R; Suzuki, A; Sakai, K; Kawahata, H. 2011. Effects of seawater pH on growth and skeletal U/Ca ratios of Acropora digitifera coral polyps. Geophysical Research Letters 38. 2011 Calcium Carbonate Deposition; Ocean Acidity; Primary Production; Stony Coral
Jiang, ZP; Huang, JC; Dai, MH; Kao, SJ; Hydes, DJ; Chou, WC; Jan, S. 2011. Short-term dynamics of oxygen and carbon in productive nearshore shallow seawater systems off Taiwan: Observations and modeling. Limnology and Oceanography 56:1832-1849. 2011 Taiwan Model CO2; Primary Production; Surface & Groundwater Flow
Jokiel, PL. 2011. Ocean Acidification And Control Of Reef Coral Calcification By Boundary Layer Limitation Of Proton Flux. Bulletin of Marine Science 87:639-657. 2011 Calcium Carbonate Deposition; Climate; Ocean Acidity; Primary Production
Jokiel, PL. 2011. The reef coral two compartment proton flux model: A new approach relating tissue-level physiological processes to gross corallum morphology. Journal of Experimental Marine Biology and Ecology 409:1-12. 2011 Model Light; Ocean Acidity; Primary Production; Stony Coral; Zooxanthellae
Kemp, DW; Oakley, CA; Thornhill, DJ; Newcomb, LA; Schmidt, GW; Fitt, AK. 2011. Catastrophic mortality on inshore coral reefs of the Florida Keys due to severe low-temperature stress. Global Change Biology 17:3468-3477. 2011 Global; South & Central America; Florida; US Pacific & Hawaii; Caribbean Algae; Anemones & Zooanthids; Climate; Ocean Acidity; Primary Production; Stony Coral
Kjaer, KH; Ottosen, CO. 2011. Growth of Chrysanthemum in Response to Supplemental Light Provided by Irregular Light Breaks during the Night. Journal of the American Society for Horticultural Science 136:3-9. 2011 Climate; Light; Primary Production; Utility Policies
Kleypas, JA; Anthony, KRN; Gattuso, JP. 2011. Coral reefs modify their seawater carbon chemistry - case study from a barrier reef (Moorea, French Polynesia). Global Change Biology 17:3667-3678. 2011 Global Field Study & Monitoring; Model Algae; Calcium Carbonate Deposition; Climate; CO2; Ocean Acidity; Primary Production; Surface & Groundwater Flow
Kolasinski, J; Rogers, K; Cuet, P; Barry, B; Frouin, P. 2011. Sources of particulate organic matter at the ecosystem scale: a stable isotope and trace element study in a tropical coral reef. Marine Ecology Progress Series 443:77-93. 2011 Reunion; India Discharges; Nutrients; Plankton; Primary Production; Sediment; Surface & Groundwater Flow
Koreny, L; Sobotka, R; Janouskovec, J; Keeling, PJ; Obornik, M. 2011. Tetrapyrrole Synthesis of Photosynthetic Chromerids Is Likely Homologous to the Unusual Pathway of Apicomplexan Parasites. Plant Cell 23:3454-3462. 2011 GIS & Maps Cyanobacteria; Microorganisms; Primary Production
Larkum, AWD; Salih, A; Kuhl, M. 2011. Rapid Mass Movement of Chloroplasts during Segment Formation of the Calcifying Siphonalean Green Alga, Halimeda macroloba. PLoS One 6. 2011 Calcareous Macroalgae; Calcium Carbonate Deposition; Primary Production; Sediment
Negri, AP; Flores, F; Rothig, T; Uthicke, S. 2011. Herbicides increase the vulnerability of corals to rising sea surface temperature. Limnology and Oceanography 56:471-485. 2011 Global Model Agriculture; Algae; Chemical Use Regulations; Climate; Coralline Algae; Fertilizer & Pesticide Use; Ocean Acidity; Primary Production; Stony Coral; Zooxanthellae
O'Gorman, EJ; Yearsley, JM; Crowe, TP; Emmerson, MC; Jacob, U; Petchey, OL. 2011. Loss of functionally unique species may gradually undermine ecosystems. Proceedings of the Royal Society B 278:1886-1893. 2011 Primary Production
Perry, RI. 2011. Potential impacts of climate change on marine wild capture fisheries: an update. Journal of Agricultural Science 149:63-75. 2011 Global; US Pacific & Hawaii; US East Coast (NC, SC, GA) Model Climate; Finfish Harvest; Fishing Sector; Ocean Acidity; Plankton; Primary Production; Special Use Permitting
Price, NN; Hamilton, SL; Tootell, JS; Smith, JE. 2011. Species-specific consequences of ocean acidification for the calcareous tropical green algae Halimeda. Marine Ecology Progress Series 440:67-78. 2011 Florida; US Pacific & Hawaii; Palmyra Atoll Algae; Calcareous Macroalgae; Calcium Carbonate Deposition; Climate; CO2; Ocean Acidity; Primary Production; Sediment; Surface & Groundwater Flow
Rasher, DB; Stout, EP; Engel, S; Kubanek, J; Hay, ME. 2011. Macroalgal terpenes function as allelopathic agents against reef corals. Proceedings of the National Academy of Sciences of the United States of America 108:17726-17731. 2011 Global Field Study & Monitoring Algae; Climate; Primary Production; Small Herbivorous Fish; Stony Coral
Reymond, CE; Uthicke, S; Pandolfi, JM. 2011. Inhibited growth in the photosymbiont-bearing foraminifer Marginopora vertebralis from the nearshore Great Barrier Reef, Australia. Marine Ecology Progress Series 435:97-U117. 2011 Australia Field Study & Monitoring; Lab Study Climate; Discharges; Non-point Source Runoff; Nutrients; Primary Production; Surface & Groundwater Flow
Ries, JB. 2011. A physicochemical framework for interpreting the biological calcification response to CO(2)-induced ocean acidification. Geochimica et Cosmochimica Acta 75:4053-4064. 2011 Model Algae; Calcareous Macroalgae; Calcium Carbonate Deposition; Ocean Acidity; Primary Production; Stony Coral
Rodolfo-Metalpa, R; Houlbreque, F; Tambutte, E; Boisson, F; Baggini, C; Patti, FP; Jeffree, R; Fine, M; Foggo, A; Gattuso, JP; Hall-Spencer, JM. 2011. Coral and mollusc resistance to ocean acidification adversely affected by warming. Nature Climate Change 1:308-312. 2011 Global Field Study & Monitoring; Lab Study CO2; Molluscs; Ocean Acidity; Primary Production; Surface & Groundwater Flow
Rollion-Bard, C; Blamart, D; Trebosc, J; Tricot, G; Mussi, A; Cuif, JP. 2011. Boron isotopes as pH proxy: A new look at boron speciation in deep-sea corals using (11)B MAS NMR and EELS. Geochimica et Cosmochimica Acta 75:1003-1012. 2011 Field Study & Monitoring Primary Production
Sawall, Y; Teichberg, MC; Seemann, J; Litaay, M; Jompa, J; Richter, C. 2011. Nutritional status and metabolism of the coral Stylophora subseriata along a eutrophication gradient in Spermonde Archipelago (Indonesia). Coral Reefs 30:841-853. 2011 Cuba; Indonesia Nutrients; Primary Production; Stony Coral; Zooxanthellae
Schottner, S; Pfitzner, B; Grunke, S; Rasheed, M; Wild, C; Ramette, A. 2011. Drivers of bacterial diversity dynamics in permeable carbonate and silicate coral reef sands from the Red Sea. Environmental Microbiology 13:1815-1826. 2011 Nutrients; Primary Production; Sediment; Surface & Groundwater Flow
Schutter, M; Kranenbarg, S; Wijffels, RH; Verreth, J; Osinga, R. 2011. Modification of light utilization for skeletal growth by water flow in the scleractinian coral Galaxea fascicularis. Marine Biology 158:769-777. 2011 Cuba Light; Primary Production; Seawater Flow; Stony Coral
Shamberger, KEF; Feely, RA; Sabine, CL; Atkinson, MJ; DeCarlo, EH; Mackenzie, FT; Drupp, PS; Butterfield, DA. 2011. Calcification and organic production on a Hawaiian coral reef. Marine Chemistry 127:64-75. 2011 US Pacific & Hawaii Model Calcium Carbonate Deposition; CO2; Ocean Acidity; Primary Production; Stony Coral
Shefferson, RP; McCormick, MK; Whigham, DF; O'Neill, JP. 2011. Life history strategy in herbaceous perennials: inferring demographic patterns from the aboveground dynamics of a primarily subterranean, myco-heterotrophic orchid. Oikos 120:1291-1300. 2011 Field Study & Monitoring; Model Environmental Monitoring, Mapping, & Scientific Research; Primary Production
Sinutok, S; Hill, R; Doblin, MA; Wuhrer, R; Ralph, PJ. 2011. Warmer more acidic conditions cause decreased productivity and calcification in subtropical coral reef sediment-dwelling calcifiers. Limnology and Oceanography 56:1200-1212. 2011 Algae; Calcareous Macroalgae; Climate; CO2; Ocean Acidity; Primary Production; Sediment; Stony Coral
Sjoo, GL; Mork, E; Andersson, S; Melander, I. 2011. Differences in top-down and bottom-up regulation of macroalgal communities between a reef crest and back reef habitat in Zanzibar. Estuarine Coastal and Shelf Science 91:511-518. 2011 South & Central America; Tanzania; Caribbean Algae; Complex Habitat & Resources; Nutrients; Primary Production; Special Use Permitting
Storlazzi, CD; Elias, E; Field, ME; Presto, MK. 2011. Numerical modeling of the impact of sea-level rise on fringing coral reef hydrodynamics and sediment transport. Coral Reefs 30:83-96. 2011 US Pacific & Hawaii Model Climate; Light; Primary Production; Sediment; Shoreline Protection; Water Depth & Sea Level
Tanaka, Y; Miyajima, T; Watanabe, A; Nadaoka, K; Yamamoto, T; Ogawa, H. 2011. Distribution of dissolved organic carbon and nitrogen in a coral reef. Coral Reefs 30:533-541. 2011 Nutrients; Plankton; Primary Production; Seagrasses; Stony Coral
Tolosa, I; Treignier, C; Grover, R; Ferrier-Pages, C. 2011. Impact of feeding and short-term temperature stress on the content and isotopic signature of fatty acids, sterols, and alcohols in the scleractinian coral Turbinaria reniformis. Coral Reefs 30:763-774. 2011 Algae; Primary Production; Stony Coral; Zooxanthellae
Tremblay, P; Peirano, A; Ferrier-Pages, C. 2011. Heterotrophy in the Mediterranean symbiotic coral Cladocora caespitosa: comparison with two other scleractinian species. Marine Ecology Progress Series 422:165-177. 2011 Plankton; Primary Production; Stony Coral; Zooxanthellae
Tseng, LC; Dahms, HU; Hsu, NJ; Hwang, JS. 2011. Effects of sedimentation on the gorgonian Subergorgia suberosa (Pallas, 1766). Marine Biology 158:1301-1310. 2011 Australia Lab Study; Model; Index or Indicator Octocoral; Primary Production; Sediment; Stony Coral
Ulstrup, KE; Kuhl, M; van Oppen, MJH; Cooper, TF; Ralph, PJ. 2011. Variation in photosynthesis and respiration in geographically distinct populations of two reef-building coral species. Aquatic Biology 12:241-248. 2011 Australia Algae; Climate; Primary Production; Special Use Permitting; Stony Coral; Zooxanthellae
Venn, A; Tambutte, E; Holcomb, M; Allemand, D; Tambutte, S. 2011. Live Tissue Imaging Shows Reef Corals Elevate pH under Their Calcifying Tissue Relative to Seawater. PLoS One 6. 2011 Model Calcium Carbonate Deposition; Ocean Acidity; Primary Production; Stony Coral
Wagner, D; Pochon, X; Irwin, L; Toonen, RJ; Gates, RD. 2011. Azooxanthellate? Most Hawaiian black corals contain Symbiodinium. Proceedings of the Royal Society B 278:1323-1328. 2011 US Pacific & Hawaii; Johnston Atoll Primary Production; Stony Coral; Zooxanthellae
Walker, RA; Hallock, P; Torres, JJ; Vargo, GA. 2011. Photosynthesis And Respiration In Five Species Of Benthic Foraminifera That Host Algal Endosymbionts. Journal of Foraminiferal Research 41:314-325. 2011 Florida; US Pacific & Hawaii Light; Primary Production
Yamazaki, A; Watanabe, T; Ogawa, NO; Ohkouchi, N; Shirai, K; Toratani, M; Uematsu, M. 2011. Seasonal variations in the nitrogen isotope composition of Okinotori coral in the tropical western Pacific: A new proxy for marine nitrate dynamics. Journal Of Geophysical Research-biogeosciences 116. 2011 US Pacific & Hawaii; Japan Decision Support Frameworks & Tools Nutrients; Primary Production; Stony Coral; Storms & Hurricanes; Zooxanthellae
Yang, WF; Huang, YP; Chen, M; Qiu, YS; Li, HB; Zhang, L. 2011. Unusually high (210)Po activities in the surface water of the Zhubi Coral Reef Lagoon in the South China Sea. Science of the Total Environment 409:4612-4617. 2011 US Pacific & Hawaii; China Model Nutrients; Primary Production; Sediment; Surface & Groundwater Flow
Zhu, BH; Pan, KH; Wang, GC. 2011. Effects of host starvation on the symbiotic dinoflagellates from the sea anemone Stichodactyla mertensii. Marine Ecology-an Evolutionary Perspective 32:15-23. 2011 Index or Indicator Anemones & Zooanthids; Nutrients; Primary Production; Stony Coral; Zooxanthellae
A. V. Borges and N. Gypens. 2010. Carbonate chemistry in the coastal zone responds more strongly to eutrophication than to ocean acidification. Limnology and Oceanography 55:346-353. 2010 Model Carbon Storage & Cycling; CO2; Nutrients; Ocean Acidity; Primary Production; Special Use Permitting; Surface & Groundwater Flow
Allison, N. and A. A. Finch. 2010. delta B-11, Sr, Mg and B in a modern Porites coral: the relationship between calcification site pH and skeletal chemistry. Geochimica et Cosmochimica Acta 74:1790-1800. 2010 US Pacific & Hawaii Model; Index or Indicator Primary Production; Stony Coral
Bertucci, A., E. Tambutte, S. Tambutte, D. Allemand, and D. Zoccola. 2010. Symbiosis-dependent gene expression in coral-dinoflagellate association: cloning and characterization of a P-type H+-ATPase gene. Proceedings of the Royal Society B 277:87-95. 2010 Primary Production; Zooxanthellae
Bielmyera, G. K., M. Grosell, R. Bhagooli, A. C. Baker, C. Langdon, P. Gillette, and T.R. Capo. 2010. Differential effects of copper on three species of scleractinian corals and their algal symbionts (Symbiodinium spp.). Aquatic Toxicology 97:125-133. 2010 Lab Study Primary Production; Stony Coral; Zooxanthellae
Bourgeois, S., S. Hochard, and O. Pringault. 2010. Subtidal microphytobenthos: effects of inorganic and organic compound supplies on migration, production, and respiration in a tropical coastal environment. Aquatic Microbial Ecology 61:13-29. 2010 New Caledonia Nutrients; Primary Production; Sediment
Cebrian, E. 2010. Grazing on coral reefs facilitates growth of the excavating sponge Cliona orientalis (Clionaidae, Hadromerida). Marine Ecology-an Evolutionary Perspective 31:533-538. 2010 Australia Algae; Boring Sponges; Corallivorous Fish; Fish; Large Herbivorous Fish; Primary Production; Sponges; Substrate; Zooxanthellae
Charpy, L., K. A. Palinska, B. Casareto, M. J. Langlade, Y. Suzuki, R. M. M. Abed, and S. Golubic. 2010. Dinitrogen-Fixing Cyanobacteria in Microbial Mats of Two Shallow Coral Reef Ecosystems. Microbial Ecology 59:174-186. 2010 US Pacific & Hawaii; Indian Ocean; Reunion; India; Pacific Ocean Decision Support Frameworks & Tools Cyanobacteria; Microorganisms; Nutrients; Primary Production
Cheng, Y. R. and C. F. Dai. 2010. Endosymbiotic copepods may feed on zooxanthellae from their coral host, Pocillopora damicornis. Coral Reefs 29:13-18. 2010 Taiwan Algae; Primary Production; Stony Coral; Zooxanthellae
Colombo-Pallotta, M. F., A. Rodriguez-Roman, and R. Iglesias-Prieto. 2010. Calcification in bleached and unbleached Montastraea faveolata: evaluating the role of oxygen and glycerol. Coral Reefs 29:899-907. 2010 South & Central America; Cuba; Caribbean Lab Study Calcium Carbonate Deposition; Primary Production; Stony Coral
Crabbe, M. J. C. 2010. Computational Biology Approaches to Plant Metabolism and Photosynthesis: Applications for Corals in Times of Climate Change and Environmental Stress. Journal of Integrative Plant Biology 52:698-703. 2010 Review Climate; Primary Production; Zooxanthellae
Crawley, A., D. I. Kline, S. Dunn, K. Anthony, and S. Dove. 2010. The effect of ocean acidification on symbiont photorespiration and productivity in Acropora formosa. Global Change Biology 16:851-863. 2010 CO2; Light; Ocean Acidity; Primary Production; Stony Coral
Csaszar, N. B. M., P. J. Ralph, R. Frankham, R. Berkelmans, and M. J. H. van Oppen. 2010. Estimating the Potential for Adaptation of Corals to Climate Warming. PLoS One 5:e9751. 2010 US Pacific & Hawaii Climate; Primary Production; Stony Coral
Edmunds, P. J. and H. S. Lenihan. 2010. Effect of sub-lethal damage to juvenile colonies of massive Porites spp. under contrasting regimes of temperature and water flow. Marine Biology 157:887-897. 2010 Cuba Corallivorous Fish; Primary Production; Seawater Flow; Stony Coral
Faxneld, S., T. L. Jorgensen, and M. Tedengren. 2010. Effects of elevated water temperature, reduced salinity and nutrient enrichment on the metabolism of the coral Turbinaria mesenterina. Estuarine Coastal and Shelf Science 88:482-487. 2010 Vietnam Climate; Nutrients; Primary Production; Salinity
Ferrier-Pages, C., C. Rottier, E. Beraud, and O. Levy. 2010. Experimental assessment of the feeding effort of three scleractinian coral species during a thermal stress: Effect on the rates of photosynthesis. Journal of Experimental Marine Biology and Ecology 390:118-124. 2010 Primary Production; Stony Coral; Zooxanthellae
Gaither, M. R. and R. Rowan. 2010. Zooxanthellar symbiosis in planula larvae of the coral Pocillopora damicornis. Journal of Experimental Marine Biology and Ecology 386:45-53. 2010 Primary Production; Stony Coral; Zooxanthellae
Garland, K. F., S. E. Burnett, L. B. Stack, and D. L. Zhang. 2010. Minimum Daily Light Integral for Growing High-quality Coleus. HortTechnology 20:929-933. 2010 Light; Primary Production
Green, D. H., P. J. Edmunds, X. Pochon, and R. D. Gates. 2010. The effects of substratum type on the growth, mortality, and photophysiology of juvenile corals in St. John, US Virgin Islands. Journal of Experimental Marine Biology and Ecology 384:18-29. 2010 US Virgin Islands Primary Production; Stony Coral
Grenz, C., L. Denis, O. Pringault, and R. Fichez. 2010. Spatial and seasonal variability of sediment oxygen consumption and nutrient fluxes at the sediment water interface in a sub-tropical lagoon (New Caledonia). Marine Pollution Bulletin 61:399-412. 2010 US Pacific & Hawaii; Cuba; Pacific Ocean; New Caledonia Nutrients; Primary Production; Sediment
Hallegraeff, G. M. 2010. Ocean Climate Change, Phytoplankton Community Responses, And Harmful Algal Blooms: A Formidable Predictive Challenge. Journal of Phycology 46:220-235. 2010 Global; US East Coast (NC, SC, GA) Field Study & Monitoring; Lab Study Algae; Climate; CO2; Fish; Non-point Source Runoff; Nutrients; Ocean Acidity; Plankton; Primary Production; Small Herbivorous Fish; Storms & Hurricanes; Surface & Groundwater Flow
Harii, S., M. Yamamoto, and O. Hoegh-Guldberg. 2010. The relative contribution of dinoflagellate photosynthesis and stored lipids to the survivorship of symbiotic larvae of the reef-building corals. Marine Biology 157:1215-1224. 2010 Primary Production; Stony Coral
Hartmann, A. C., J. E. Carilli, R. D. Norris, C. D. Charles, and D. D. Deheyn. 2010. Stable isotopic records of bleaching and endolithic algae blooms in the skeleton of the boulder forming coral Montastraea faveolata. Coral Reefs 29:1079-1089. 2010 Algae; Primary Production; Stony Coral
Heindel, K., D. Birgel, J. Peckmann, H. Kuhnert, and H. Westphal. 2010. Formation Of Deglacial Microbialites In Coral Reefs Off Tahiti (Iodp 310) Involving Sulfate-Reducing Bacteria. Palaios 25:618-635. 2010 Algae; Coralline Algae; Cyanobacteria; Microorganisms; Nutrients; Primary Production; Water Depth & Sea Level
Hennige, S. J., D. J. Smith, S. J. Walsh, M. P. McGinley, M. E. Warner, and D. J. Suggett. 2010. Acclimation and adaptation of scleractinian coral communities along environmental gradients within an Indonesian reef system. Journal of Experimental Marine Biology and Ecology 391:143-152. 2010 Indonesia Climate; Primary Production; Stony Coral
Hill, R. W., C. Li, A. D. Jones, J. P. Gunn, and P. R. Frade. 2010. Abundant betaines in reef-building corals and ecological indicators of a photoprotective role. Coral Reefs 29:869-880. 2010 Field Study & Monitoring; Index or Indicator Algae; Light; Primary Production; Stony Coral
Hoogenboom, M., E. Beraud, and C. Ferrier-Pages. 2010. Relationship between symbiont density and photosynthetic carbon acquisition in the temperate coral Cladocora caespitosa. Coral Reefs 29:21-29. 2010 Field Study & Monitoring; Lab Study; Model Primary Production; Stony Coral
Hoogenboom, M., R. Rodolfo-Metalpa, and C. Ferrier-Pages. 2010. Co-variation between autotrophy and heterotrophy in the Mediterranean coral Cladocora caespitosa. Journal of Experimental Biology 213:2399-2409. 2010 Cuba Nutrients; Primary Production; Special Use Permitting; Stony Coral
Jantzen, C., C. Wild, M. Rasheed, M. El-Zibdah, and C. Richter. 2010. Enhanced pore-water nutrient fluxes by the upside-down jellyfish Cassiopea sp in a Red Sea coral reef. Marine Ecology Progress Series 411:117-U162. 2010 Nutrients; Primary Production; Sediment; Zooxanthellae
Juranek, L. W. and P. D. Quay. 2010. Basin-wide photosynthetic production rates in the subtropical and tropical Pacific Ocean determined from dissolved oxygen isotope ratio measurements. Global Biogeochemical Cycles 24:GB2006. 2010 US Pacific & Hawaii; Australia; Pacific Ocean Field Study & Monitoring; Model Primary Production
Kim, S., K. K. Hammerstom, K. E. Conlan, and A. R. Thurber. 2010. Polar Ecosystem Dynamics: Recovery of Communities from Organic Enrichment in McMurdo Sound, Antarctica. Integrative And Comparative Biology 50:1031-1040. 2010 Primary Production; Whales & Dolphins
Kroeker, K. J., R. L. Kordas, R. N. Crim, and G. G. Singh. 2010. Meta-analysis reveals negative yet variable effects of ocean acidification on marine organisms. Ecology Letters 13:1419-1434. 2010 Calcium Carbonate Deposition; Climate; CO2; Ocean Acidity; Primary Production
Kuguru, B., Y. Achituv, D. F. Gruber, and D. Tchernov. 2010. Photoacclimation mechanisms of corallimorpharians on coral reefs: Photosynthetic parameters of zooxanthellae and host cellular responses to variation in irradiance. Journal of Experimental Marine Biology and Ecology 394:53-62. 2010 Light; Primary Production; Zooxanthellae
LaVigne, M., K. A. Matthews, A. G. Grottoli, K. M. Cobb, E. Anagnostou, G. Cabioch, and R. M. Sherrell. 2010. Coral skeleton P/Ca proxy for seawater phosphate: Multi-colony calibration with a contemporaneous seawater phosphate record. Geochimica et Cosmochimica Acta 74:1282-1293. 2010 Panama Nutrients; Primary Production; Stony Coral; Surface & Groundwater Flow
Lilley, R. M., P. J. Ralph, and A. W. D. Larkum. 2010. The determination of activity of the enzyme Rubisco in cell extracts of the dinoflagellate alga Symbiodinium sp by manganese chemiluminescence and its response to short-term thermal stress of the alga. Plant Cell And Environment 33:995-1004. 2010 Invertebrates; Microorganisms; Primary Production
MacNeil, M. A., N. A. J. Graham, J. E. Cinner, N. K. Dulvy, P. A. Loring, S. Jennings, N. V. C. Polunin, A. T. Fisk, and T. R. McClanahan. 2010. Transitional states in marine fisheries: adapting to predicted global change. Philosophical Transactions of the Royal Society B: Biological Sciences 365:3753-3763. 2010 Global; Indian Ocean; India Climate; Finfish Harvest; Fish; Fishing Sector; Primary Production
Magnusson, M., K. Heimann, P. Quayle, and A. P. Negri. 2010. Additive toxicity of herbicide mixtures and comparative sensitivity of tropical benthic microalgae. Marine Pollution Bulletin 60:1978-1987. 2010 Australia Algae; Fertilizer & Pesticide Use; Primary Production
Maier, C., M. G. Weinbauer, and J. Patzold. 2010. Stable isotopes reveal limitations in C and N assimilation in the Caribbean reef corals Madracis auretenra, M. carmabi and M. formosa. Marine Ecology Progress Series 412:103-112. 2010 South & Central America; Caribbean Light; Nutrients; Primary Production; Stony Coral; Water Depth & Sea Level; Zooxanthellae
Mass, T., A. Genin, U. Shavit, M. Grinstein, and D. Tchernov. 2010. Flow enhances photosynthesis in marine benthic autotrophs by increasing the efflux of oxygen from the organism to the water. Proceedings of the National Academy of Sciences of the United States of America 107:2527-2531. 2010 Algae; CO2; Nutrients; Primary Production; Seagrasses; Stony Coral
Mass, T., D. I. Kline, M. Roopin, C. J. Veal, S. Cohen, D. Iluz, and O. Levy. 2010. The spectral quality of light is a key driver of photosynthesis and photoadaptation in Stylophora pistillata colonies from different depths in the Red Sea. Journal of Experimental Biology 213:4084-4091. 2010 Algae; Light; Primary Production; Surface & Groundwater Flow; Zooxanthellae
Murali, M. R., S. B. Raja, and S. N. Devaraj. 2010. Neutralization of radical toxicity by temperature-dependent modulation of extracellular SOD activity in coral bleaching pathogen Vibrio shiloi and its role as a virulence factor. Archives of Microbiology 192:619-623. 2010 Algae; Microorganisms; Pathogens; Primary Production; Zooxanthellae
Ogston, A. S. and M. E. Field. 2010. Predictions of Turbidity Due to Enhanced Sediment Resuspension Resulting from Sea-Level Rise on a Fringing Coral Reef: Evidence from Molokai, Hawaii. Journal of Coastal Research 26:1027-1037. 2010 Global; US Pacific & Hawaii Climate; Light; Primary Production; Sediment; Shoreline Protection; Water Depth & Sea Level
Ogston, A. S. and M. E. Field. 2010. Predictions of turbidity due to enhanced sediment resuspension resulting from sea-level rise on f Fringing coral reef: evidence from Molokai, Hawaii. Journal of Coastal Research 26:1027-1037. 2010 Global; US Pacific & Hawaii Climate; Light; Primary Production; Sediment; Shoreline Protection; Water Depth & Sea Level
Ramirez-Llodra, E., A. Brandt, R. Danovaro, B. De Mol, E. Escobar, C. R. German, L. A. Levin, P. M. Arbizu, L. Menot, P. Buhl-Mortensen, B. E. Narayanaswamy, C. R. Smith, D. P. Tittensor, P. A. Tyler, A. Vanreusel, and M. Vecchione. 2010. Deep, diverse and definitely different: unique attributes of the world's largest ecosystem. Biogeosciences 7:2851-2899. 2010 Global Review Finfish Harvest; Microorganisms; Primary Production
Ries, J. B. 2010. Review: geological and experimental evidence for secular variation in seawater Mg/Ca (calcite-aragonite seas) and its effects on marine biological calcification. Biogeosciences 7:2795-2849. 2010 Global Review; Lab Study Algae; Calcium Carbonate Deposition; CO2; Echinoderms; Marine Worms; Microorganisms; Ocean Acidity; Primary Production; Sediment
Roder, C., L. Fillinger, C. Jantzen, G. M. Schmidt, S. Khokiattiwong, and C. Richter. 2010. Trophic response of corals to large amplitude internal waves. Marine Ecology Progress Series 412:113-128. 2010 Thailand Primary Production; Stony Coral
Rodolfo-Metalpa, R., S. Martin, C. Ferrier-Pages, and J. P. Gattuso. 2010. Response of the temperate coral Cladocora caespitosa to mid- and long-term exposure to pCO(2) and temperature levels projected for the year 2100 AD. Biogeosciences 7:289-300. 2010 Calcium Carbonate Deposition; CO2; Ocean Acidity; Primary Production
Schoon, R., A. Bissett, and D. de Beer. 2010. Resilience of pore-water chemistry and calcification in photosynthetic zones of calcifying sediments. Limnology and Oceanography 55:377-385. 2010 Australia Lab Study Primary Production; Sediment
Schutter, M., J. Crocker, A. Paijmans, M. Janse, R. Osinga, A. J. Verreth, and R. H. Wijffels. 2010. The effect of different flow regimes on the growth and metabolic rates of the scleractinian coral Galaxea fascicularis. Coral Reefs DOI10.1007/s00338-010-0617-2. 2010 Algae; Cyanobacteria; Microorganisms; Nutrients; Primary Production; Seawater Flow; Stony Coral
Sorokin, Y. I. and P. Y. Sorokin. 2010. Plankton of the central Great Barrier Reef: abundance, production and trophodynamic roles. Journal of the Marine Biological Association of the United Kingdom 90:1173-1187. 2010 Australia Algae; Mangroves; Nutrients; Plankton; Primary Production; Substrate
Springer, Y. P., C. G. Hays, M. H. Carr, and M. R. Mackey. 2010. Toward Ecosystem-Based Management Of Marine Macroalgae-The Bull Kelp, Nereocystis Luetkeana. Pages 1-41 Oceanography And Marine Biology: An Annual Review, Vol 48. 2010 Review Algae; Primary Production
Stanley, S. M., J. B. Ries, and L. A. Hardie. 2010. Increased Production Of Calcite And Slower Growth For The Major Sediment-Producing Alga Halimeda As The Mg/Ca Ratio Of Seawater Is Lowered To A "Calcite Sea" Level. Journal of Sedimentary Research 80:6-16. 2010 Lab Study Algae; Calcareous Macroalgae; Calcium Carbonate Deposition; CO2; Primary Production; Sediment
Tait, L. W. and D. R. Schiel. 2010. Primary productivity of intertidal macroalgal assemblages: comparison of laboratory and in situ photorespirometry. Marine Ecology Progress Series 416:115-125. 2010 Field Study & Monitoring; Lab Study Algae; Light; Primary Production; Sediment
Titlyanov, E. A., S. I. Kiyashko, T. V. Titlyanova, and J. A. Raven. 2010. delta C-13 and delta N-15 in tissue of coral polyps and epilithic algae inhabiting damaged coral colonies under the influence of different light intensities. Aquatic Ecology 44:13-21. 2010 Algae; Light; Nutrients; Primary Production; Stony Coral; Zooxanthellae
Torreton, J. P., E. Rochelle-Newall, O. Pringault, S. Jacquet, V. Faure, and E. Briand. 2010. Variability of primary and bacterial production in a coral reef lagoon (New Caledonia). Marine Pollution Bulletin 61:335-348. 2010 US Pacific & Hawaii; Pacific Ocean; New Caledonia Microorganisms; Nutrients; Plankton; Primary Production
Unsworth, R. K. F., S. De Grave, and L. Y. D. Goulding. 2010. Influence Of Environmental Cycles Upon A Seagrass Caridean Shrimp Assemblage. Raffles Bulletin of Zoology 58:349-355. 2010 US Pacific & Hawaii; Indonesia Lobster, Crab, & Shrimp; Primary Production; Seagrasses
van Doorn, W. G. and K. Yoshimoto. 2010. Role of chloroplasts and other plastids in ageing and death of plants and animals: A tale of Vishnu and Shiva. Ageing Research Reviews 9:117-130. 2010 Algae; Food, Beverage, & Tobacco Products; Primary Production; Sponges; Stony Coral
Yost, D. M., R. J. Jones, and C. L. Mitchelmore. 2010. Alterations in dimethylsulfoniopropionate (DMSP) levels in the coral Montastraea franksi in response to copper exposure. Aquatic Toxicology 98:367-373. 2010 Index or Indicator Algae; Primary Production; Stony Coral
Becker, E. L., E. E. Cordes, S. A. Macko, and C. R. Fisher. 2009. Importance of seep primary production to Lophelia pertusa and associated fauna in the Gulf of Mexico. Deep-Sea Research Part I: Oceanographic Research Papers 56:786-800. 2009 South & Central America; Mexico Lobster, Crab, & Shrimp; Marine Worms; Nutrients; Primary Production; Snails & Conch
Brandano, M., V. Frezza, L. Tomassetti, and M. Cuffaro. 2009. Heterozoan carbonates in oligotrophic tropical waters: The Attard member of the lower coralline limestone formation (Upper Oligocene, Malta). Palaeogeography, Palaeoclimatology, Palaeoecology 274:54-63. 2009 Non-point Source Runoff; Nutrients; Primary Production; Sediment
Buxton, L., M. Badger, and P. Ralph. 2009. Effects Of Moderate Heat Stress And Dissolved Inorganic Carbon Concentration On Photosynthesis And Respiration Of Symbiodinium Sp (Dinophyceae) In Culture And In Symbiosis. Journal of Phycology 45:357-365. 2009 Model CO2; Primary Production; Zooxanthellae
Buxton, L., M. Badger, and P. Ralph. 2009. Effects of moderate heat stress and dissolved inorganic carbon concentration on photosynthesis and respiration of symbiodinium sp. (dinophyceae) in culture and in symbiosis. Journal of Phycology 45:357-365. 2009 Model CO2; Primary Production; Zooxanthellae
Copertino, M. S., A. Cheshire, and T. Kildea. 2009. Photophysiology of a turf algal community: Integrated responses to ambient light and standing biomass. Journal of Phycology 45:324-336. 2009 Australia Primary Production; Substrate; Turf Algae
Einbinder, S., T. Mass, E. Brokovich, Z. Dubinsky, J. Erez, and D. Tchernov. 2009. Changes in morphology and diet of the coral Stylophora pistillata along a depth gradient. Marine Ecology Progress Series 381:167-174. 2009 Field Study & Monitoring Algae; Carbon Storage & Cycling; Nutrients; Plankton; Primary Production; Zooxanthellae
Ferrier-Pages, C., E. Tambutte, T. Zamoum, N. Segonds, P. L. Merle, N. Bensoussan, D. Allemand, J. Garrabou, and S. Tambutte. 2009. Physiological response of the symbiotic gorgonian Eunicella singularis to a long-term temperature increase. Journal of Experimental Biology 212:3007-3015. 2009 Global Lab Study Climate; Octocoral; Primary Production
Figueroa, F. L., B. Martinez, A. Israel, A. Neori, E. J. Malta, P. Ang, S. Inken, R. Marquardt, T. Rachamim, U. Arazi, S. Frenk, and N. Korbee. 2009. Acclimation of Red Sea macroalgae to solar radiation: photosynthesis and thallus absorptance. Aquatic Biology 7:159-172. 2009 Cuba Field Study & Monitoring Algae; Fleshy Macroalgae; Light; Nutrients; Primary Production
Goffredo, S., E. Caroselli, G. Mattioli, E. Pignotti, Z. Dubinsky, and F. Zaccanti. 2009. Inferred level of calcification decreases along an increasing temperature gradient in a Mediterranean endemic coral. Limnology and Oceanography 54:930-937. 2009 Field Study & Monitoring Algae; Calcium Carbonate Deposition; Climate; Light; Primary Production
Granek, E. F., J. E. Compton, and D. L. Phillips. 2009. Mangrove-exported nutrient incorporation by sessile coral reef invertebrates. Ecosystems 12:462-472. 2009 Panama Model Algae; Bivalves; Mangroves; Marine Worms; Molluscs; Nutrients; Plankton; Primary Production; Seagrasses; Sponges; Stony Coral; Tunicates
Guenette, S. and R. L. Hill. 2009. A trophic model of the coral reef ecosystem of La Parguera, Puerto Rico: synthesizing fisheries and ecological data. Caribbean Journal of Science 45:317-337. 2009 South & Central America; Puerto Rico; Caribbean Model Corallivorous Fish; Finfish Harvest; Fish; Fishing Sector; Large Herbivorous Fish; Primary Production
Hanelt, D. and M. Y. Roleda. 2009. UVB radiation may ameliorate photoinhibition in specific shallow-water tropical marine macrophytes. Aquatic Botany 91:12-Jun. 2009 South & Central America; Belize; Caribbean Algae; Calcareous Macroalgae; Fleshy Macroalgae; Light; Primary Production; Seagrasses
Higuchi, T., H. Fujimura, H. Ikota, T. Arakaki, and T. Oomori. 2009. The effects of hydrogen peroxide on metabolism in the coral Goniastrea aspera. Journal of Experimental Marine Biology and Ecology 370:48-55. 2009 Cuba Primary Production; Stony Coral
Higuchi, T., H. Fujimura, T. Arakaki, and T. Oomori. 2009. The synergistic effects of hydrogen peroxide and elevated seawater temperature on the metabolic activity of the coral Galaxea fascicularis. Marine Biology 156:589-596. 2009 Cuba Primary Production
Hoogenboom, M. O. and S. R. Connolly. 2009. Defining fundamental niche dimensions of corals: Synergistic effects of colony size, light, and flow. Ecology 90:767-780. 2009 Field Study & Monitoring; Lab Study; Model Light; Primary Production; Seawater Flow; Stony Coral
Hoogenboom, M. O., S. R. Connolly, and K. R. N. Anthony. 2009. Effects of photoacclimation on the light niche of corals: a process-based approach. Marine Biology 156:2493-2503. 2009 Light; Primary Production; Stony Coral
Houlbreque, F. and C. Ferrier-Pages. 2009. Heterotrophy in tropical scleractinian corals. Biological Review 84:17-Jan. 2009 Review Algae; Microorganisms; Nutrients; Plankton; Primary Production; Stony Coral; Zooxanthellae
Houlbreque, F. and C. Ferrier-Pages. 2009. Heterotrophy in Tropical Scleractinian Corals. Biological Reviews 84:1-17. 2009 Review Algae; Microorganisms; Nutrients; Plankton; Primary Production; Stony Coral; Zooxanthellae
Khalesi, M. K., H. H. Beeftink, and R. H. Wijffels. 2009. Light-dependency of growth and secondary metabolite production in the captive zooxanthellate soft coral sinularia flexibilis. Marine Biotechnology 11:488-494. 2009 Algae; Light; Octocoral; Pharmaceuticals & Cosmetics; Pharmaceuticals & Cosmetics Sources; Primary Production; Zooxanthellae
Kramarsky-Winter, E., C. A. Downs, A. Downs, and Y. Loya. 2009. Cellular responses in the coral Stylophora pistillata exposed to eutrophication from fish mariculture. Evolutionary Ecology Research 11:381-401. 2009 Egypt Decision Support Frameworks & Tools Aquaculture; Fish; Nutrients; Primary Production; Stony Coral
Lasram, F. B., F. Guilhaumon, and D. Mouillot. 2009. Fish diversity patterns in the Mediterranean Sea: deviations from a mid-domain model. Marine Ecology Progress Series 376:253-267. 2009 Model; GIS & Maps Climate; Fish; Primary Production; Surface & Groundwater Flow
Lee, T.-C. and B.-D. Hsu. 2009. Disintegration of the cells of siphonous green alga codium edule (bryopsidales, chlorophyta) under mild heat stress. Journal of Phycology 45:348-356. 2009 Cuba; Taiwan Field Study & Monitoring Algae; Primary Production
Levin, L. A., G. F. Mendoza, T. Konotchick, and R. Lee. 2009. Macrobenthos community structure and trophic relationships within active and inactive Pacific hydrothermal sediments. Deep-Sea Research Part II: Topical Studies in Oceanography 56:1632-1648. 2009 US Pacific & Hawaii; Pacific Ocean; Papua New Guinea Field Study & Monitoring Bivalves; Invertebrates; Marine Worms; Primary Production; Sediment
Lirman, D. and D. Manzello. 2009. Patterns of resistance and resilience of the stress-tolerant coral Siderastrea radians (Pallas) to sub-optimal salinity and sediment burial. Journal of Experimental Marine Biology and Ecology 369:72-77. 2009 Florida Primary Production; Salinity; Sediment; Stony Coral
Luz, B. and E. Barkan. 2009. Net and gross oxygen production from O-2/Ar, O-17/O-16 and O-18/O-16 ratios. Aquatic Microbial Ecology 56:133-145. 2009 US East Coast (NC, SC, GA); Atlantic Ocean; Cuba; Bermuda Field Study & Monitoring; Lab Study Primary Production
Miller, R. J., D. C. Reed, and M. A. Brzezinski. 2009. Community structure and productivity of subtidal turf and foliose algal assemblages. Marine Ecology Progress Series 388:1-11. 2009 Algae; Invertebrates; Primary Production; Turf Algae
Millero, F. J., R. Woosley, B. Ditrolio, and J. Waters. 2009. Effect of ocean acidification on the speciation of metals in seawater. Oceanography 22:72-85. 2009 Review CO2; Nutrients; Ocean Acidity; Primary Production
Mortillaro, J. M., K. A. Pitt, S. Y. Lee, and T. Meziane. 2009. Light intensity influences the production and translocation of fatty acids by zooxanthellae in the jellyfish Cassiopea sp. Journal of Experimental Marine Biology and Ecology 378:22-30. 2009 Australia Light; Lobster, Crab, & Shrimp; Plankton; Primary Production; Zooxanthellae
Myers, J. L. and L. L. Richardson. 2009. Adaptation of cyanobacteria to the sulfide-rich microenvironment of black band disease of coral. FEMS Microbiology Ecology 67:242-251. 2009 Global; Europe Cyanobacteria; Microorganisms; Pathogens; Primary Production
Nakamura, T. and T. Nakamori. 2009. Estimation of photosynthesis and calcification rates at a fringing reef by accounting for diurnal variations and the zonation of coral reef communities on reef flat and slope: A case study for the Shiraho reef, Ishigaki Island, southwest Japan. Coral Reefs 28:229-250. 2009 Cuba; Japan CO2; Primary Production; Stony Coral; Water Depth & Sea Level
Olbers, J. M., L. Celliers, and M. H. Schleyer. 2009. Zonation of benthic communities on the subtropical Aliwal Shoal, Durban, KwaZulu-Natal, South Africa. African Zoology 44:8-23. 2009 Cuba; South Africa Algae; Marine Protected Areas; Marine Worms; Octocoral; Primary Production; Sediment; Shoreline Protection; Sponges; Stony Coral
Omann, I., A. Stocker, and J. Jager. 2009. Climate change as a threat to biodiversity: an application of the DPSIR approach. Ecological Economics 69:24-31. 2009 Global Decision Support Frameworks & Tools Climate; Greenhouse Gas Emissions; Mitigation; Primary Production; Water Depth & Sea Level
Oxford Economics. 2009. Valuing the effects of Great Barrier Reef bleaching. 2009 Global; Australia Review Climate; CO2; Marine Protected Areas; Monetary Valuation; Nutrients; Pathogens; Primary Production; Sea Temperatures; Stony Coral; Tourism & Recreation; Valuation
Richardson, L. L., A. W. Miller, E. Broderick, L. Kaczmarsky, M. Gantar, D. Stanic, and R. Sekar. 2009. Sulfide, microcystin, and the etiology of black band disease. Diseases of Aquatic Organisms 87:79-90. 2009 Model Cyanobacteria; Microorganisms; Pathogens; Primary Production
Ries, J. B. 2009. Effects of secular variation in seawater Mg/Ca ratio (calcite-aragonite seas) on CaCO3 sediment production by the calcareous algae Halimeda, Penicillus and Udotea- evidence from recent experiments and the geological record. Terra Nova 21:323-339. 2009 Algae; Calcareous Macroalgae; Calcium Carbonate Deposition; CO2; Primary Production; Sediment
Ries, J. B., A. L. Cohn, and D. C. McCorkle. 2009. Marine calcifiers exhibit mixed responses to CO2-induced ocean acidification. Geology 37:1131-1134. 2009 Lab Study Calcium Carbonate Deposition; CO2; Ocean Acidity; Primary Production
Sauchyn, L. K. and R. E. Scheibling. 2009. Degradation of sea urchin feces in a rocky subtidal ecosystem: implications for nutrient cycling and energy flow. Aquatic Biology 6:99-108. 2009 US East Coast (NC, SC, GA) Invertebrates; Nutrients; Primary Production; Sea Urchins
Schneider, K., O. Levy, Z. Dubinsky, and J. Erez. 2009. In situ diel cycles of photosynthesis and calcification in hermatypic corals. Limnology and Oceanography 54:1995-2002. 2009 Cuba Algae; Light; Plankton; Primary Production; Stony Coral
Semesi, I. S., J. Kangwe, and M. Bjork. 2009. Alterations in seawater pH and CO2 affect calcification and photosynthesis in the tropical coralline alga, Hydrolithon sp (Rhodophyta). Estuarine Coastal and Shelf Science 84:337-341. 2009 Indian Ocean; India Algae; Calcium Carbonate Deposition; CO2; Coralline Algae; Ocean Acidity; Primary Production; Seagrasses
Shaw, M., A. Negri, K. Fabricius, and J. F. Mueller. 2009. Predicting water toxicity: Pairing passive sampling with bioassays on the Great Barrier Reef. Aquatic Toxicology 95:108-116. 2009 Australia Decision Support Frameworks & Tools Agriculture; Fertilizer & Pesticide Use; Microorganisms; Primary Production; Sea Urchins; Stony Coral
Sheikh, M. A., T. Higuchi, H. Fujimura, T. S. Imo, T. Miyagi, and T. Oomori. 2009. Contamination and impacts of new antifouling biocide Irgarol-1051 on subtropical coral reef waters. International Journal of Environmental Science and Technology 6:353-358. 2009 Japan Fishing Sector; Primary Production
Sisma-Ventura, G., B. Guzner, R. Yam, M. Fine, and A. Shemesh. 2009. The reef builder gastropod Dendropoma petreaum - A proxy of short and long term climatic events in the Eastern Mediterranean. Geochimica et Cosmochimica Acta 73:4376-4383. 2009 Global; US East Coast (NC, SC, GA) Calcium Carbonate Deposition; CO2; Nutrients; Primary Production; Surface & Groundwater Flow
Tice, M. M. 2009. Environmental Controls on Photosynthetic Microbial Mat Distribution and Morphogenesis on a 3.42 Ga Clastic-Starved Platform. Astrobiology 9:989-1000. 2009 Primary Production; Sediment; Storms & Hurricanes; Utility Policies
Titlyanov, E. A., S. I. Kiyashko, T. V. Titlyanova, and J. A. Raven. 2009. δ13C and δ15N in tissue of coral polyps and epilithic algae inhabiting damaged coral colonies under the influence of different light intensities. Aquatic Ecology 9-Jan. 2009 Algae; Light; Nutrients; Primary Production; Stony Coral; Zooxanthellae
Todd, P. A., J. H. Lee, and L. M. Chou. 2009. Polymorphism and crypsis in the boring giant clam (Tridacna crocea): potential strategies against visual predators. Hydrobiologia 635:37-43. 2009 US Pacific & Hawaii; Malaysia; Oman Bivalves; Primary Production; Skeletal Coral; Substrate; Zooxanthellae
Treignier, C., I. Tolosa, R. Grover, S. Reynaud, and C. Ferrier-Pages. 2009. Carbon isotope composition of fatty acids and sterols in the scleractinian coral Turbinaria reniformis: Effect of light and feeding. Limnology and Oceanography 54:1933-1940. 2009 Light; Plankton; Primary Production; Stony Coral; Zooxanthellae
Venn, A. A., E. Tambutte, S. Lotto, D. Zoccola, D. Allemand, and S. Tambutte. 2009. Imaging intracellular pH in a reef coral and symbiotic anemone. Proceedings of the National Academy of Sciences of the United States of America 106:16574-16579. 2009 Global; Cuba Model; GIS & Maps Algae; Anemones & Zooanthids; Climate; Primary Production
Voolstra, C. R., S. Sunagawa, J. A. Schwarz, M. A. Coffroth, D. Yellowlees, W. Leggat, and M. Medina. 2009. Evolutionary analysis of orthologous cDNA sequences from cultured and symbiotic dinoflagellate symbionts of reef-building corals (Dinophyceae: Symbiodinium). Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics 4:67-74. 2009 Primary Production; Stony Coral; Zooxanthellae
Bell, J. J. 2008. The functional roles of marine sponges. Estuarine Coastal and Shelf Science 79:341-353. 2008 Review; Field Study & Monitoring; Decision Support Frameworks & Tools Biological Monitoring, Mapping, & Scientific Research; Carbon Storage & Cycling; Nutrients; Primary Production; Sponges; Substrate
Borell, E. M., A. R. Yuliantri, K. Bischof, and C. Richter. 2008. The effect of heterotrophy on photosynthesis and tissue composition of two scleractinian corals under elevated temperature. Journal of Experimental Marine Biology and Ecology 364:116-123. 2008 Plankton; Primary Production; Stony Coral; Zooxanthellae
Bruschetti, M., T. Luppi, E. Fanjul, A. Rosenthal, and O. Iribarne. 2008. Grazing effect of the invasive reef-forming polychaete Ficopomatus enigmaticus (Fauvel) on phytoplankton biomass in a SW Atlantic coastal lagoon. Journal of Experimental Marine Biology and Ecology 354:212-219. 2008 US East Coast (NC, SC, GA) Invasive Species; Marine Worms; Nutrients; Plankton; Primary Production; Seawater Flow
Burns, K. A., G. Brunskill, D. Brinkman, and I. Zagorskis. 2008. Organic carbon and nutrient fluxes to the coastal zone from the Sepik River outflow. Continental Shelf Research 28:283-301. 2008 Papua New Guinea Carbon Storage & Cycling; Discharges; Nutrients; Primary Production; Sediment; Surface & Groundwater Flow
Caras, T., A. Bachar, and Z. Pasternak. 2008. Morphological variation in the oral disc of the scleractinian coral Favia speciosa (Dana) at Indonesia. Computational Biology and Chemistry 32:345-348. 2008 Indonesia Primary Production; Sediment; Stony Coral
Cherbadgy, I. I. and L. N. Propp. 2008. Photosynthesis and respiration of a deep-water periphyton community (Macclesfield Bank, South China Sea). Russian Journal of Marine Biology 34:301-308. 2008 China Field Study & Monitoring Algae; Calcareous Macroalgae; Coralline Algae; Light; Microorganisms; Molluscs; Primary Production; Skeletal Coral; Sponges; Substrate
Clavier, J., L. Chauvaud, P. Cuet, C. Esbelin, P. Frouin, D. Taddei, and G. Thouzeau. 2008. Diel variation of benthic respiration in a coral reef sediment (Reunion Island, Indian Ocean). Estuarine Coastal and Shelf Science 76:369-377. 2008 Indian Ocean; Reunion; India CO2; Primary Production; Sediment
De Paiva, A. C. G., P. D. T. D. C. Chaves, and M. E. De Araujo. 2008. Trophic organization and structure of shallow water ichthyofauna in a tropical estuary [Estrutura e organizacão trofica da ictiofauna de aguas rasas em um estuario tropical]. Revista Brasileira de Zoologia 25:647-661. 2008 Fish; Mangroves; Plankton; Primary Production; Sediment; Surface & Groundwater Flow
Dimond, J. and E. Carrington. 2008. Symbiosis regulation in a facultatively symbiotic temperate coral: Zooxanthellae division and expulsion. Coral Reefs 27:601-604. 2008 England Index or Indicator Primary Production; Special Use Permitting; Stony Coral; Zooxanthellae
Dong, J., Y. Zhang, Y. Wang, S. Zhang, and H. Wang. 2008. Spatial and seasonal variations of cyanobacteria and their nitrogen fixation rates in Sanya Bay, South China Sea. Scientia Marina 72:239-251. 2008 China Cyanobacteria; Microorganisms; Nutrients; Plankton; Primary Production; Salinity; Sediment
Dove, S. G., C. Lovell, M. Fine, J. Deckenback, O. Hoegh-Guldberg, R. Iglesias-Prieto, and K. R. N. Anthony. 2008. Host pigments: Potential facilitators of photosynthesis in coral symbioses. Plant, Cell and Environment 31:1523-1533. 2008 Light; Primary Production; Stony Coral
Dupouy, C., A. Minghelli-Roman, M. Despinoy, R. Rottgers, J. Neveux, C. Pinazo, and M. Petit. 2008. MODIS/Aqua chlorophyll monitoring of the New Caledonia lagoon during the 2008 La Nina event. Proceedings of SPIE - The International Society for Optical Engineering 7150:715014. 2008 US Pacific & Hawaii; Pacific Ocean; New Caledonia Field Study & Monitoring; Model Climate; Plankton; Primary Production
Erwin, P. M. and R. W. Thacker. 2008. Phototrophic nutrition and symbiont diversity of two Caribbean sponge-cyanobacteria symbioses. Marine Ecology Progress Series 362:139-147. 2008 South & Central America; US Pacific & Hawaii; Caribbean Field Study & Monitoring Cyanobacteria; Light; Microorganisms; Primary Production; Sponges
Foubert, A., D. Depreiter, T. Beck, L. Maignien, B. Pannemans, N. Frank, D. Blamart, and J.-P. Henriet. 2008. Carbonate mounds in a mud volcano province off north-west Morocco: Key to processes and controls. Marine Geology 248:74-96. 2008 Field Study & Monitoring; Model Calcium Carbonate Deposition; Plankton; Primary Production; Sediment; Stony Coral; Substrate; Water Depth & Sea Level
Freire, K. M. F., V. Christensen, and D. Pauly. 2008. Description of the East Brazil Large Marine Ecosystem using a trophic model. Scientia Marina 72:477-491. 2008 US East Coast (NC, SC, GA) Model Algae; Apex Fish Predators; Finfish Harvest; Fish; Fisheries & Hunting Policies; Fishing & Harvesting Management; Fishing Sector; Lobster, Crab, & Shrimp; Plankton; Primary Production; Seagrasses; Whales & Dolphins
Fujimura, H., T. Higuchi, K. Shiroma, T. Arakaki, A. M. Hamdun, Y. Nakano, and T. Oomori. 2008. Continuous-flow complete-mixing system for assessing the effects of environmental factors on colony-level coral metabolism. Journal of Biochemical and Biophysical Methods 70:865-872. 2008 Primary Production; Stony Coral
Fujita, K. and H. Fujimura. 2008. Organic and inorganic carbon production by algal symbiont-bearing foraminifera on northwest Pacific coral-reef flats. Journal of Foraminiferal Research 38:117-126. 2008 US Pacific & Hawaii; Cuba; Pacific Ocean Ports & Harbors; Primary Production
Gibson. T., H. Wanless, J. Klaus, P. Foster-Turley, K. Florini, T. Olson. 2008. Corals and Climate Change: Florida�s Natural Treasures at Risk. Environmental Defense Fund. 2008 Global; Florida Climate; CO2; Commercial Fisheries; Finfish Harvest; Fishing Sector; Greenhouse Gas Emissions; Natural Gas & Electric Power; Nutrients; Pathogens; Primary Production; Recreational Fishing; Sea Temperatures; Sediment; Skeletal Coral; Storms & Hurricanes; Tourism & Recreation; Water Depth & Sea Level
Gruner, D. S., J. E. Smith, E. W. Seabloom, S. A. Sandin, J. T. Ngai, H. Hillebrand, W. S. Harpole, J. J. Elser, E. E. Cleland, M. E. S. Bracken, E. T. Borer, and B. M. Bolker. 2008. A cross-system synthesis of consumer and nutrient resource control on producer biomass. Ecology Letters 11:740-755. 2008 Review; Model Invertebrates; Nutrients; Primary Production
Hajkowicz, S. A. 2008. Supporting multi-stakeholder environmental decisions. Journal of Environmental Management 88:607-614. 2008 Australia Model; Decision Support Frameworks & Tools Decision Support; Primary Production
Herfort, L., B. Thake, and I. Taubner. 2008. Bicarbonate stimulation of calcification and photosynthesis in two hermatypic corals. Journal of Phycology 44:91-98. 2008 US Pacific & Hawaii Primary Production; Stony Coral
Hoch, MA TT HE W. P., K. S. Dillon, R. B. Coffin, and L. A. Cifuentes. 2008. Sensitivity of bacterioplankton nitrogen metabolism to eutrophication in sub-tropical coastal waters of Key West, Florida. Marine Pollution Bulletin 56:913-926. 2008 Florida Index or Indicator Microorganisms; Nutrients; Plankton; Primary Production
Hochberg, E. J. and M. J. Atkinson. 2008. Coral reef benthic productivity based on optical absorptance and light-use efficiency. Coral Reefs 27:49-59. 2008 Model; Remote Sensing Light; Primary Production
Hoogenboom, M. O., S. R. Connolly, and K. R. N. Anthony. 2008. Interactions between morphological and physiological plasticity optimize energy acquisition in corals. Ecology 89:1144-1154. 2008 Model Primary Production; Stony Coral
Iglesias-Rodriguez, M. D., P. R. Halloran, R. E. M. Rickaby, I. R. Hall, E. Colmenero-Hidalgo, J. R. Gittins, D. R. H. Green, T. Tyrrell, S. J. Gibbs, P. Von Dassow, E. Rehm, E. V. Armbrust, and K. P. Boessenkool. 2008. Phytoplankton calcification in a high-CO2 world. Science 320:336-340. 2008 Field Study & Monitoring; Lab Study; Model Calcium Carbonate Deposition; Climate; CO2; Ocean Acidity; Plankton; Primary Production
Jantzen, C., C. Wild, M. El-Zibdah, H. A. Roa-Quiaoit, C. Haacke, and C. Richter. 2008. Photosynthetic performance of giant clams, Tridacna maxima and T. squamosa, Red Sea. Marine Biology 155:211-221. 2008 Cuba; Egypt Dive, Snorkeling, & Swimming Tourism; Light; Primary Production; Zooxanthellae
Kaniewska, P., K. R. N. Anthony, and O. Hoegh-Guldberg. 2008. Variation in colony geometry modulates internal light levels in branching corals, Acropora humilis and Stylophora pistillata. Marine Biology 155:649-660. 2008 Australia Light; Primary Production; Special Use Permitting; Stony Coral
Kuhl, M. and L. Polerecky. 2008. Functional and structural imaging of phototrophic microbial communities and symbioses. Aquatic Microbial Ecology 53:99-118. 2008 GIS & Maps CO2; Environmental Monitoring, Mapping, & Scientific Research; Primary Production; Sediment
Leichter, J. J., M. D. Stokes, and S. J. Genovese. 2008. Deep water macroalgal communities adjacent to the Florida Keys reef tract. Marine Ecology Progress Series 356:123-138. 2008 Florida; Cuba Algae; Light; Nutrients; Primary Production
Magnusson, M., K. Heimann, and A. P. Negri. 2008. Comparative effects of herbicides on photosynthesis and growth of tropical estuarine microalgae. Marine Pollution Bulletin 56:1545-1552. 2008 Australia Algae; Fertilizer & Pesticide Use; Primary Production
Margolin, C. L. 2008. Use of the coral-sel technique in the study of small scale water flow environments on coral growth. Pages 479-483 in Proceedings of the 11th International Coral Reef Symposium. 2008 Primary Production; Seawater Flow; Stony Coral; Zooxanthellae
Marubini, F., C. Ferrier-Pages, P. Furla, and D. Allemand. 2008. Coral calcification responds to seawater acidification: A working hypothesis towards a physiological mechanism. Coral Reefs 27:491-499. 2008 Cuba Calcium Carbonate Deposition; CO2; Primary Production; Stony Coral; Substrate
Marynowski, L., P. Filipiak, and A. Pisarzowska. 2008. Organic geochemistry and palynofacies of the Early-Middle Frasnian transition (Late Devonian) of the Holy Cross Mountains, Southern Poland. Palaeogeography, Palaeoclimatology, Palaeoecology 269:152-165. 2008 Poland Nutrients; Primary Production; Sediment
Mass, T. and A. Genin. 2008. Environmental versus intrinsic determination of colony symmetry in the coral Pocillopora verrucosa. Marine Ecology Progress Series 369:131-137. 2008 Primary Production; Stony Coral; Zooxanthellae
Moya, A., S. Tambutte, A. Bertucci, E. Tambutte, S. Lotto, D. Vullo, C. T. Supuran, D. Allemand, and D. Zoccola. 2008. Carbonic anhydrase in the scleractinian coral Stylophora pistillata: Characterization, localization, and role in biomineralization. Journal of Biological Chemistry 283:25475-25484. 2008 Primary Production; Special Use Permitting; Stony Coral
Nakamura, T. and H. Yamasaki. 2008. Flicker light effects on photosynthesis of symbiotic algae in the reef-building coral Acropora digitifera (Cnidaria: Anthozoa: Scleractinia). Pacific Science 62:341-350. 2008 Algae; Complex Habitat & Resources; Light; Primary Production; Stony Coral
Omata, T., A. Suzuki, T. Sato, K. Minoshima, E. Nomaru, A. Murakami, S. Murayama, H. Kawahata, and T. Maruyama. 2008. Effect of photosynthetic light dosage on carbon isotope composition in the coral skeleton: Long-term culture of Porites spp. Journal of Geophysical Research G: Biogeosciences 113. 2008 Algae; Light; Primary Production; Stony Coral
Piniak, G. A. and C. D. Storlazzi. 2008. Diurnal variability in turbidity and coral fluorescence on a fringing reef flat: Southern Molokai, Hawaii. Estuarine Coastal and Shelf Science 77:56-64. 2008 US Pacific & Hawaii Model Light; Primary Production; Sediment
Pinkerton, M. H., C. J. Lundquist, C. A. J. Duffy, and D. J. Freeman. 2008. Trophic modelling of a New Zealand rocky reef ecosystem using simultaneous adjustment of diet, biomass and energetic parameters. Journal of Experimental Marine Biology and Ecology 367:189-203. 2008 Model Algae; Invertebrates; Lobster, Crab, & Shrimp; Microorganisms; Plankton; Primary Production; Sediment; Sponges
Polerecky, L., C. Lott, and M. Weber. 2008. In situ measurement of gross photosynthesis using a microsensor-based light-shade shift method. Limnology and Oceanography: Methods 6:373-383. 2008 Field Study & Monitoring; Model Primary Production
Pomar, L. and P. Hallock. 2008. Carbonate factories: A conundrum in sedimentary geology. Earth-Science Reviews 87:134-169. 2008 Global Model Algae; Climate; CO2; Microorganisms; Nutrients; Plankton; Primary Production; Sediment; Sponges; Surface & Groundwater Flow
Riegel, W. 2008. The Late Palaeozoic phytoplankton blackout - Artefact or evidence of global change? Review of Palaeobotany and Palynology 148:73-90. 2008 Global Climate; Nutrients; Plankton; Primary Production
Riul, P., C. H. Targino, J. D. N. Farias, P. T. Visscher, and P. A. Horta. 2008. Decrease in Lithothamnion sp. (Rhodophyta) primary production due to the deposition of a thin sediment layer. Journal of the Marine Biological Association of the United Kingdom 88:17-19. 2008 Oman; United Kingdom Agriculture; Algae; Calcium Carbonate Deposition; Coralline Algae; Dredging, Draining, & Filling; Light; Primary Production; Sediment
Rochelle-Newall, E. J., J.-P. Torreton, X. Mari, and O. Pringault. 2008. Phytoplankton-bacterioplankton coupling in a subtropical South Pacific coral reef lagoon. Aquatic Microbial Ecology 50:221-229. 2008 US Pacific & Hawaii; Australia; Cuba; New Caledonia Carbon Storage & Cycling; Microorganisms; Nutrients; Plankton; Primary Production
Rodolfo-Metalpa, R., Y. Huot, and C. Ferrier-Pages. 2008. Photosynthetic response of the Mediterranean zooxanthellate coral Cladocora caespitosa to the natural range of light and temperature. Journal of Experimental Biology 211:1579-1586. 2008 Light; Primary Production; Zooxanthellae
Roopin, M., R. P. Henry, and N. E. Chadwick. 2008. Nutrient transfer in a marine mutualism: Patterns of ammonia excretion by anemonefish and uptake by giant sea anemones. Marine Biology 154:547-556. 2008 Cuba Field Study & Monitoring; Lab Study; Model Anemones & Zooanthids; Fish; Nutrients; Planktivorous Fish; Plankton; Primary Production; Zooxanthellae
Rosa, R., H. M. Dierssen, L. Gonzalez, and B. A. Seibel. 2008. Ecological biogeography of cephalopod molluscs in the Atlantic Ocean: Historical and contemporary causes of coastal diversity patterns. Global Ecology and Biogeography 17:600-610. 2008 South & Central America; US East Coast (NC, SC, GA); Atlantic Ocean Model Climate; Complex Habitat & Resources; Molluscs; Octopus & Squid; Primary Production
Schonberg, C. H. L., R. Suwa, M. Hidaka, and W. K. W. Loh. 2008. Sponge and coral zooxanthellae in heat and light: Preliminary results of photochemical efficiency monitored with pulse amplitude modulated fluorometry. Marine Ecology 29:247-258. 2008 Boring Sponges; Climate; Primary Production; Sponges; Stony Coral; Zooxanthellae
Schutter, M., B. van Velthoven, M. Janse, R. Osinga, M. Janssen, R. Wijffels, and J. Verreth. 2008. The effect of irradiance on long-term skeletal growth and net photosynthesis in Galaxea fascicularis under four light conditions. Journal of Experimental Marine Biology and Ecology 367:75-80. 2008 Light; Primary Production; Stony Coral
Shaw, C. M., P. K. S. Lam, and J. F. Mueller. 2008. Photosystem II herbicide pollution in Hong Kong and its potential photosynthetic effects on corals. Marine Pollution Bulletin 57:473-478. 2008 Fertilizer & Pesticide Use; Primary Production; Zooxanthellae
Shaw, E. C., A. J. Gabric, and G. H. McTainsh. 2008. Impacts of aeolian dust deposition on phytoplankton dynamics in Queensland coastal waters. Marine and Freshwater Research 59:951-962. 2008 Australia Model Cyanobacteria; Microorganisms; Nutrients; Plankton; Primary Production; Storms & Hurricanes
Stambler, N., O. Levy, and L. Vaki. 2008. Photosynthesis and respiration of hermatypic zooxanthellate Red Sea corals from 5-75-m depth. Israel Journal of Plant Sciences 56:45-53. 2008 Primary Production; Stony Coral; Zooxanthellae
Suggett, D. J., M. E. Warner, D. J. Smith, P. Davey, S. Hennige, and N. R. Baker. 2008. Photosynthesis and production of hydrogen peroxide by Symbiodinium (Pyrrhophyta) phylotypes with different thermal tolerances. Journal of Phycology 44:948-956. 2008 South & Central America; Caribbean Algae; Primary Production; Stony Coral
Sun, D., R. Su, T. A. McConnaughey, and J. Bloemendal. 2008. Variability of skeletal growth and δ13C in massive corals from the South China Sea: Effects of photosynthesis, respiration and human activities. Chemical Geology 255:414-425. 2008 China Light; Nutrients; Primary Production; Stony Coral
Tanaka, Y., T. Miyajima, I. Koike, T. Hayashibara, and H. Ogawa. 2008. Production of dissolved and particulate organic matter by the reef-building corals Porites cylindrica and Acropora pulchra. Bulletin of Marine Science 82:237-245. 2008 Cuba Nutrients; Primary Production; Stony Coral
Treignier, C., R. Grover, C. Ferrier-Pages, and I. Tolosa. 2008. Effect of light and feeding on the fatty acid and sterol composition of zooxanthellae and host tissue isolated from the scleractinian coral Turbinaria reniformis. Limnology and Oceanography 53:2702-2710. 2008 Algae; Light; Plankton; Primary Production; Stony Coral; Zooxanthellae
Venn, A. A., J. E. Loram, and A. E. Douglas. 2008. Photosynthetic symbioses in animals. Pages 1069-1080 in Journal of Experimental Botany. 2008 Algae; Anemones & Zooanthids; Cyanobacteria; Light; Microorganisms; Nutrients; Primary Production; Sponges
Wang, L.-H., Y.-H. Liu, Y.-M. Ju, Y.-Y. Hsiao, L.-S. Fang, and C.-S. Chen. 2008. Cell cycle propagation is driven by light-dark stimulation in a cultured symbiotic dinoflagellate isolated from corals. Coral Reefs 27:823-835. 2008 Primary Production
Werner, U., A. Blazejak, P. Bird, G. Eickert, R. Schoon, R. M. M. Abed, A. Bissett, and D. de Beer. 2008. Microbial photosynthesis in coral reef sediments (Heron Reef, Australia). Estuarine Coastal and Shelf Science 76:876-888. 2008 Australia Algae; Cyanobacteria; Microorganisms; Nutrients; Primary Production; Sediment
Wilmsen, M. and F. Neuweiler. 2008. Biosedimentology of the Early Jurassic post-extinction carbonate depositional system, central High Atlas rift basin, Morocco. Sedimentology 55:773-807. 2008 Climate; Echinoderms; Marine Worms; Plankton; Primary Production; Sediment; Sponges
Wolanski, E., K. E. Fabricius, T. F. Cooper, and C. Humphrey. 2008. Wet season fine sediment dynamics on the inner shelf of the Great Barrier Reef. Estuarine Coastal and Shelf Science 77:755-762. 2008 Australia Landscape Conservation & Restoration; Light; Nutrients; Primary Production; Sediment; Surface & Groundwater Flow
Zepp, R. G., G. C. Shank, E. Stabenau, K. W. Patterson, M. Cyterski, W. Fisher, E. Bartels, and S. L. Anderson. 2008. Spatial and temporal variability of solar ultraviolet exposure of coral assemblages in the Florida Keys: Importance of colored dissolved organic matter. Limnology and Oceanography 53:1909-1922. 2008 Florida Model Light; Primary Production
Alongi, D. M., L. A. Trott, and J. Pfitzner. 2007. Deposition, mineralization, and storage of carbon and nitrogen in sediments of the far northern and northern Great Barrier Reef shelf. Continental Shelf Research 27:2595-2622. 2007 Australia; Cuba; Europe CO2; Discharges; Nutrient & Contaminant Processing; Nutrients; Plankton; Primary Production; Sediment; Surface & Groundwater Flow; Trawling & Fishing Gear Damage; Water Depth & Sea Level
Biel, K. Y., R. D. Gates, and L. Muscatine. 2007. Effects of free amino acids on the photosynthetic carbon metabolism of symbiotic dinoflagellates. Russian Journal of Plant Physiology 54:171-183. 2007 Cuba Model Anemones & Zooanthids; Primary Production; Stony Coral
Brando, V. E., B. J. Robson, N. R. C. Cherukuru, A. G. Dekker, and I. T. Webster. 2007. Towards assimilation of ocean colour satellite observation into coastal ocean biogeochemical models: The tropical Fitzroy River Estuary case study. Proceedings of SPIE - The International Society for Optical Engineering 6685. 2007 Global; Australia Field Study & Monitoring; Model; Remote Sensing Nutrients; Primary Production; Sediment; Surface & Groundwater Flow
Camilli, R., O. Pizarro, and L. Camilli. 2007. Rapid swath mapping of reef ecology and associated water column chemistry in the Gulf of Chiriqui, Panama. in Oceans Conference Record (IEEE). 2007 US Pacific & Hawaii; Panama; Pacific Ocean GIS & Maps Biological Monitoring, Mapping, & Scientific Research; Complex Habitat & Resources; Primary Production
Campbell, S. J., L. J. McKenzie, S. P. Kerville, and J. S. Bite. 2007. Patterns in tropical seagrass photosynthesis in relation to light, depth and habitat. Estuarine Coastal and Shelf Science 73:551-562. 2007 Australia Index or Indicator Climate; Light; Primary Production; Seagrasses
Cantin, N. E., A. P. Negri, and B. L. Willis. 2007. Photoinhibition from chronic herbicide exposure reduces reproductive output of reef-building corals. Marine Ecology Progress Series 344:81-93. 2007 Australia Fertilizer & Pesticide Use; Primary Production; Stony Coral
Carleton, J. H. and A. D. McKinnon. 2007. Resident mysids: Secondary production, consumption, and trophic role in a coral reef lagoon. Marine Ecology Progress Series 336:89-98. 2007 US Pacific & Hawaii; Australia Microorganisms; Plankton; Primary Production; Sediment
Carpenter, L. W. and M. R. Patterson. 2007. Water flow influences the distribution of photosynthetic efficiency within colonies of the scleractinian coral Montastrea annularis (Ellis and Solander, 1786); implications for coral bleaching. Journal of Experimental Marine Biology and Ecology 351:26-Oct. 2007 Primary Production; Seawater Flow; Special Use Permitting; Stony Coral; Surface & Groundwater Flow
Carpenter, R. C. and S. L. Williams. 2007. Mass transfer limitation of photosynthesis of coral reef algal turfs. Marine Biology 151:435-450. 2007 US Pacific & Hawaii Primary Production
Charpy, L., R. Alliod, M. Rodier, and S. Golubic. 2007. Benthic nitrogen fixation in the SW New Caledonia lagoon. Aquatic Microbial Ecology 47:73-81. 2007 New Caledonia Cyanobacteria; Microorganisms; Nutrients; Primary Production
Dawson, T. L. 2007. Light-harvesting and light-protecting pigments in simple life forms. Coloration Technology 123:129-142. 2007 Review Algae; Light; Primary Production
De Goeij, J. M. and F. C. Van Duyl. 2007. Coral cavities are sinks of dissolved organic carbon (DOC). Limnology and Oceanography 52:2608-2617. 2007 Antilles; Indonesia Primary Production
Debrenne, F. 2007. Lower Cambrian archaeocyathan bioconstructions. Comptes Rendus - Palevol 6:19-May. 2007 Primary Production
Downs, C. and A. Downs. 2007. Preliminary examination of short-term cellular toxicological responses of the coral Madracis mirabilis to acute Irgarol 1051 exposure. Archives of Environmental Contamination and Toxicology 52:47-57. 2007 Fertilizer & Pesticide Use; Primary Production; Stony Coral
Elahi, R. and P. J. Edmunds. 2007. Determinate growth and the scaling of photosynthetic energy intake in the solitary coral Fungia concinna (Verrill). Journal of Experimental Marine Biology and Ecology 349:183-193. 2007 Model Anemones & Zooanthids; Primary Production; Stony Coral
Fagan, K. E. and F. T. Mackenzie. 2007. Air-sea CO2 exchange in a subtropical estuarine-coral reef system, Kaneohe Bay, Oahu, Hawaii. Marine Chemistry 106:174-191. 2007 US Pacific & Hawaii CO2; Non-point Source Runoff; Nutrients; Plankton; Primary Production; Storms & Hurricanes; Surface & Groundwater Flow; Water Depth & Sea Level
Finelli, C. M., B. S. Helmuth, N. D. Pentcheff, and D. S. Wethey. 2007. Intracolony variability in photosynthesis by corals is affected by water flow: Role of oxygen flux. Marine Ecology Progress Series 349:103-110. 2007 Florida Field Study & Monitoring Light; Primary Production; Seawater Flow; Stony Coral; Surface & Groundwater Flow
Fishe, W. S., W. P. Davis, R. L. Quarles, J. Patrick, J. G. Campbell, P. S. Harris, B. L. Hemmer, and M. Parsons. 2007. Characterizing coral condition using estimates of three-dimensional colony surface area. Environmental Monitoring and Assessment 125:347-360. 2007 Florida Field Study & Monitoring Biological Monitoring, Mapping, & Scientific Research; Calcium Carbonate Deposition; Fishing Sector; Infrastructure; Primary Production; Shoreline Protection; Stony Coral; Tourism & Recreation; Valuation
Furnas, M. 2007. Intra-seasonal and inter-annual variations in phytoplankton biomass, primary production and bacterial production at North West Cape, Western Australia: Links to the 1997-1998 El Nino event. Continental Shelf Research 27:958-980. 2007 Australia; Indian Ocean; India; Indonesia Light; Microorganisms; Nutrients; Plankton; Primary Production; Surface & Groundwater Flow; Water Depth & Sea Level
Goffredo, S., E. Caroselli, E. Pignotti, G. Mattioli, and F. Zaccanti. 2007. Variation in biometry and population density of solitary corals with solar radiation and sea surface temperature in the Mediterranean Sea. Marine Biology 152:351-361. 2007 Light; Primary Production; Zooxanthellae
Hirayama, H., M. Sunamura, K. Takai, T. Nunoura, T. Noguchi, H. Oida, Y. Furushima, H. Yamamoto, T. Oomori, and K. Horikoshi. 2007. Culture-dependent and -independent characterization of microbial communities associated with a shallow submarine hydrothermal system occurring within a coral reef off Taketomi Island, Japan. Applied and Environmental Microbiology 73:7642-7656. 2007 Japan Microorganisms; Primary Production
Janssen, J., J. E. Marsden, C. R. Bronte, D. J. Jude, S. P. Sitar, and F. W. Goetz. 2007. Challenges to deep-water reproduction by lake trout: Pertinence to restoration in Lake Michigan. Journal of Great Lakes Research 33:59-74. 2007 Cuba Invasive Species; Plankton; Primary Production
Khalesi, M. K., H. H. Beeftink, and R. H. Wijffels. 2007. Flow-dependent growth in the zooxanthellate soft coral Sinularia flexibilis. Journal of Experimental Marine Biology and Ecology 351:106-113. 2007 Octocoral; Pharmaceuticals & Cosmetics; Pharmaceuticals & Cosmetics Sources; Primary Production; Zooxanthellae
Lau, R. K. L., A. C. M. Kwok, W. K. Chan, T. Y. Zhang, and J. T. Y. Wong. 2007. Mechanical characterization of cellulosic thecal plates in dinoflagellates by nanoindentation. Journal of Nanoscience and Nanotechnology 7:452-457. 2007 Microorganisms; Plankton; Primary Production
Lesser, M. P., L. I. Falcon, A. Rodriguez-Roman, S. Enriquez, O. Hoegh-Guldberg, and R. Iglesias-Prieto. 2007. Nitrogen fixation by symbiotic cyanobacteria provides a source of nitrogen for the scleractinian coral Montastraea cavernosa. Marine Ecology Progress Series 346:143-152. 2007 South & Central America; Caribbean Field Study & Monitoring; Model Cyanobacteria; Microorganisms; Nutrients; Primary Production; Stony Coral; Zooxanthellae
Masotti, I., D. Ruiz-Pino, and A. Le Bouteiller. 2007. Photosynthetic characteristics of Trichodesmium in the southwest Pacific Ocean: Importance and significance. Marine Ecology Progress Series 338:47-59. 2007 US Pacific & Hawaii; Pacific Ocean Cyanobacteria; Light; Microorganisms; Plankton; Primary Production; Surface & Groundwater Flow
Mass, T., S. Einbinder, E. Brokovich, N. Shashar, R. Vago, J. Erez, and Z. Dubinsky. 2007. Photoacclimation of Stylophora pistillata to light extremes: Metabolism and calcification. Marine Ecology Progress Series 334:93-102. 2007 Plankton; Primary Production
McKinnon, A. D., J. H. Carleton, and S. Duggan. 2007. Pelagic production and respiration in the Gulf of Papua during May 2004. Continental Shelf Research 27:1643-1655. 2007 Cuba Discharges; Plankton; Primary Production; Surface & Groundwater Flow
Miyajima, T., H. Hata, Y. Umezawa, H. Kayanne, and I. Koike. 2007. Distribution and partitioning of nitrogen and phosphorus in a fringing reef lagoon of Ishigaki Island, northwestern Pacific. Marine Ecology Progress Series 341:45-57. 2007 US Pacific & Hawaii; China Model Nutrients; Primary Production
Myers, J. L., R. Sekar, and L. L. Richardson. 2007. Molecular detection and ecological significance of the cyanobacterial genera Geitlerinema and Leptolyngbya in black band disease of corals. Applied and Environmental Microbiology 73:5173-5182. 2007 Florida; US Virgin Islands; Bahamas; Philippines Field Study & Monitoring; Lab Study Cyanobacteria; Light; Microorganisms; Pathogens; Primary Production; Stony Coral
Nakamura, T. and T. Nakamori. 2007. A geochemical model for coral reef formation. Coral Reefs 26:741-755. 2007 Field Study & Monitoring; Model Primary Production
Nisbet, E. G., N. V. Grassineau, C. J. Howe, P. I. Abell, M. Regelous, and R. E. R. Nisbet. 2007. The age of Rubisco: The evolution of oxygenic photosynthesis. Geobiology 5:311-335. 2007 CO2; Primary Production
Oren, A. and N. Gunde-Cimerman. 2007. Mycosporines and mycosporine-like amino acids: UV protectants or multipurpose secondary metabolites? FEMS Microbiology Letters 269:10-Jan. 2007 Europe Review Algae; Cyanobacteria; Microorganisms; Nutrients; Primary Production; Sunscreen Use
Pawlik, J. R., L. Steindler, T. P. Henkel, S. Beer, and M. Ilan. 2007. Chemical warfare on coral reefs: Sponge metabolites differentially affect coral symbiosis in situ. Limnology and Oceanography 52:907-911. 2007 South & Central America; Caribbean Algae; Primary Production; Sponges; Zooxanthellae
Peirano, A. 2007. In vivo measurements of the seasonal photosynthetic fluorescence of the Mediterranean coral Cladocora caespitosa (L.). Scientia Marina 71:629-635. 2007 Cuba Light; Plankton; Primary Production; Zooxanthellae
Ralph, P. J., A. W. D. Larkum, and M. Kuhl. 2007. Photobiology of endolithic microorganisms in living coral skeletons: 1. Pigmentation, spectral reflectance and variable chlorophyll fluorescence analysis of endoliths in the massive corals Cyphastrea serailia, Porites lutea and Goniastrea australensis. Marine Biology 152:395-404. 2007 Light; Microorganisms; Primary Production; Stony Coral
Rodrigues, L. J. and A. G. Grottoli. 2007. Energy reserves and metabolism as indicators of coral recovery from bleaching. Limnology and Oceanography 52:1874-1882. 2007 Index or Indicator Primary Production; Zooxanthellae
Rosenberg, E., O. Koren, L. Reshef, R. Efrony, and I. Zilber-Rosenberg. 2007. The role of microorganisms in coral health, disease and evolution. Nature Reviews Microbiology 5:355-362. 2007 Field Study & Monitoring Algae; Microorganisms; Nutrients; Pathogens; Primary Production
Silverman, J., B. Lazar, and J. Erez. 2007. Community metabolism of a coral reef exposed to naturally varying dissolved inorganic nutrient loads. Biogeochemistry 84:67-82. 2007 Calcium Carbonate Deposition; Nutrients; Primary Production
Tanaka, Y., T. Miyajima, I. Koike, T. Hayashibara, and H. Ogawa. 2007. Imbalanced coral growth between organic tissue and carbonate skeleton caused by nutrient enrichment. Limnology and Oceanography 52:1139-1146. 2007 Cuba Lab Study Nutrients; Primary Production; Stony Coral; Zooxanthellae
Thiel, M., E. C. Macaya, E. Acuna, W. E. Arntz, H. Bastias, K. Brokordt, P. A. Camus, J. C. Castilla, L. R. Castro, M. Cortes, C. P. Dumont, R. Escribano, M. Fernandez, J. A. Gajardo, C. F. Gaymer, I. Gomez, A. E. Gonzalez, H. E. Gonzalez, P. A. Haye, and J.-E. Illanes. 2007. The Humboldt Current System of northern and central Chile - Oceanographic processes, ecological interactions and socioeconomic feedback. Oceanography and Marine Biology 45:195-344. 2007 South & Central America Review; Field Study & Monitoring; Decision Support Frameworks & Tools Algae; Decision Support; Environmental Monitoring, Mapping, & Scientific Research; Fishing Sector; Invertebrates; Marine Birds; Marine Protected Areas; Microorganisms; Non-point Source Runoff; Nutrients; Plankton; Primary Production; Sediment; Surface & Groundwater Flow; Whales & Dolphins
Titlyanov, E. A., I. M. Yakovleva, and T. V. Titlyanova. 2007. Interaction between benthic algae (Lyngbya bouillonii, Dictyota dichotoma) and scleractinian coral Porites lutea in direct contact. Journal of Experimental Marine Biology and Ecology 342:282-291. 2007 Algae; Fleshy Macroalgae; Light; Primary Production; Stony Coral; Substrate; Zooxanthellae
Ulstrup, K. E., M. J. H. Van Oppen, M. Kuhl, and P. J. Ralph. 2007. Inter-polyp genetic and physiological characterisation of Symbiodinium in an Acropora valida colony. Marine Biology 153:225-234. 2007 Algae; Climate; Light; Primary Production; Stony Coral; Zooxanthellae
Ulstrup, K. E., M. Kuhl, and D. G. Bourne. 2007. Zooxanthellae harvested by ciliates associated with brown band syndrome of corals remain photosynthetically competent. Applied and Environmental Microbiology 73:1968-1975. 2007 Light; Primary Production; Zooxanthellae
van der Velde, M., S. R. Green, M. Vanclooster, and B. E. Clothier. 2007. Sustainable development in small island developing states: Agricultural intensification, economic development, and freshwater resources management on the coral atoll of Tongatapu. Ecological Economics 61:456-468. 2007 US Pacific & Hawaii; Australia; Pacific Ocean; Japan; Tonga Decision Support Frameworks & Tools Agriculture; Primary Production; Tourism & Recreation
Zepp, R.G., G.C. Shank, E. Stabenau, K.W. Patterson, and M. Cyterski. 2007. Geographic and seasonal variations in UV exposure of coral assemblages in the Florida Keys. Limnology and Oceanography 2007 Florida Model Light; Primary Production
Zhukova, N. V. 2007. Changes in the fatty acid composition of symbiotic dinoflagellates from the hermatypic coral Echinopora lamellosa during adaptation to the irradiance level. Russian Journal of Plant Physiology 54:763-769. 2007 Light; Primary Production; Zooxanthellae
Alongi, D. M., J. Pfitzner, and L. A. Trott. 2006. Deposition and cycling of carbon and nitrogen in carbonate mud of the lagoons of Arlington and Sudbury Reefs, Great Barrier Reef. Coral Reefs 25:123-143. 2006 Australia; Cuba Calcium Carbonate Deposition; CO2; Nutrients; Primary Production; Sediment
Beach, K. S., L. J. Walters, and H. B. Borgeas. 2006. Irradiance and nutrient limitation of Dicytota spp. populations on Conch Reef, Florida Keys, USA. Journal of Experimental Marine Biology and Ecology 329:101-112. 2006 Florida Field Study & Monitoring Fleshy Macroalgae; Light; Nutrients; Primary Production
Bjorn, L. O. and N. G. A. Ekelund. 2006. Corals and zooxanthellae - A marine partnership [Koraller och zooxantheller - Ett marint partnerskap]. Svensk Botanisk Tidskrift 100:263-270. 2006 Algae; Climate; CO2; Petroleum Spills; Primary Production; Stony Coral; Zooxanthellae
Brock, J. C., K. K. Yates, R. B. Halley, I. B. Kuffner, C. W. Wright, and B. G. Hatcher. 2006. Northern Florida reef tract benthic metabolism scaled by remote sensing. Marine Ecology Progress Series 312:123-139. 2006 Florida; Cuba GIS & Maps; Remote Sensing Calcium Carbonate Deposition; Nutrients; Primary Production
Bruno, J. F., S. C. Lee, J. S. Kertesz, R. C. Carpenter, Z. T. Long, and J. Emmett Duffy. 2006. Partitioning the effects of algal species identity and richness on benthic marine primary production. Oikos 115:170-178. 2006 Jamaica Field Study & Monitoring Algae; Primary Production
Carbery, K., R. Owen, T. Frickers, E. Otero, and J. Readman. 2006. Contamination of Caribbean coastal waters by the antifouling herbicide Irgarol 1051. Marine Pollution Bulletin 52:635-644. 2006 South & Central America; US Virgin Islands; Puerto Rico; Caribbean Fertilizer & Pesticide Use; Mangroves; Primary Production
Copertino, M. S., A. Cheshire, and J. Watling. 2006. Photoinhibition and photoacclimation of turf algal communities on a temperate reef, after in situ transplantation experiments. Journal of Phycology 42:580-592. 2006 Australia Algae; Light; Primary Production; Substrate; Turf Algae
Crabbe, M. J. C. and D. J. Smith. 2006. Modelling variations in corallite morphology of Galaxea fascicularis coral colonies with depth and light on coastal fringing reefs in the Wakatobi Marine National Park (S.E. Sulawesi, Indonesia). Computational Biology and Chemistry 30:155-159. 2006 Indonesia Model Light; Primary Production; Sediment
Davy, S. K., K. J. T. Withers, and R. Hinde. 2006. Effects of host nutritional status and seasonality on the nitrogen status of zooxanthellae in the temperate coral Plesiastrea versipora (Lamarck). Journal of Experimental Marine Biology and Ecology 335:256-265. 2006 Field Study & Monitoring; Index or Indicator Nutrients; Plankton; Primary Production; Stony Coral; Zooxanthellae
DeBoer, M. L., D. A. Krupp, and V. M. Weis. 2006. Two atypical carbonic anhydrase homologs from the planula larva of the scleractinian coral Fungia scutaria. Biological Bulletin 211:18-30. 2006 US Pacific & Hawaii Lab Study Anemones & Zooanthids; Primary Production; Stony Coral
Dominik, C. M. and R. C. Zimmerman. 2006. Dynamics of carbon allocation in a deep-water population of the deciduous kelp Pleurophycus gardneri (Laminariales). Marine Ecology Progress Series 309:143-157. 2006 US Pacific & Hawaii Model Carbon Storage & Cycling; Light; Primary Production; Storms & Hurricanes
Downs, C. and A. Downs. 2006. Preliminary examination of short-term cellular toxicologic responsesof the coral Madracis mirabilis to acute irgarol 1051 exposure. Archives of Environmental Contamination and Toxicology 20:1-10. 2006 Primary Production
Enriquez, S. and A. Rodriguez-Roman. 2006. Effect of water flow on the photosynthesis of three marine macrophytes from a fringing-reef lagoon. Marine Ecology Progress Series 323:119-132. 2006 Algae; Fleshy Macroalgae; Light; Primary Production; Seagrasses; Seawater Flow
Field, S. F., M. Y. Bulina, I. V. Kelmanson, J. P. Bielawski, and M. V. Matz. 2006. Adaptive evolution of multicolored fluorescent proteins in reef-building corals. Journal of Molecular Evolution 62:332-339. 2006 Field Study & Monitoring Algae; Primary Production; Special Use Permitting; Stony Coral; Zooxanthellae
Finelli, C. M., B. S. T. Helmuth, N. D. Pentcheff, and D. S. Wethey. 2006. Water flow influences oxygen transport and photosynthetic efficiency in corals. Coral Reefs 25:47-57. 2006 Field Study & Monitoring Mitigation; Primary Production; Seawater Flow; Stony Coral; Zooxanthellae
Gattuso, J.-P., B. Gentili, C. M. Duarte, J. A. Kleypas, J. J. Middelburg, and D. Antoine. 2006. Light availability in the coastal ocean: Impact on the distribution of benthic photosynthetic organisms and contribution to primary production. Biogeosciences Discussions 3:895-959. 2006 Global Review Algae; Light; Primary Production; Seagrasses
Gili, J.-M., S. Rossi, F. Pages, C. Orejas, N. Teixido, P. J. Lopez-Gonzalez, and W. E. Arntz. 2006. A new trophic link between the pelagic and benthic systems on the Antarctic shelf. Marine Ecology Progress Series 322:43-49. 2006 Octocoral; Plankton; Primary Production; Sediment
Gimenez Casalduero, F. and C. Muniain. 2006. Photosynthetic activity of the solar-powered lagoon mollusc Elysia timida (Risso, 1818) (Opisthobranchia: Sacoglossa). Symbiosis 41:151-158. 2006 Model Calcareous Macroalgae; Light; Molluscs; Primary Production; Zooxanthellae
Grant, A. J., D. A. Trautman, I. Menz, and R. Hinde. 2006. Separation of two cell signalling molecules from a symbiotic sponge that modify algal carbon metabolism. Biochemical and Biophysical Research Communications 348:92-98. 2006 Primary Production; Sponges
Grant, A. J., M. Remond, T. Starke-Peterkovic, and R. Hinde. 2006. A cell signal from the coral Plesiastrea versipora reduces starch synthesis in its symbiotic alga, Symbiodinium sp. Comparative Biochemistry and Physiology Part A 144:458-463. 2006 Cuba Algae; Primary Production; Stony Coral
Halpern, B.S., K. Cottenie, B.R. Broitman. 2006. Strong Top-Down Control in Southern California Kelp Forest Ecosystems. Science 312:1230-1232. 2006 Global Finfish Harvest; Non-point Source Runoff; Nutrients; Primary Production; Special Use Permitting
Hase, C., M. Al-Qutob, Z. Dubinsky, E. A. Ibrahim, B. Lazar, N. Stambler, and M. M. Tilzer. 2006. A system in balance? - Implications of deep vertical mixing for the nitrogen budget in the northern Red Sea, including the Gulf of Aqaba (Eilat). Biogeosciences Discussions 3:383-408. 2006 Nutrient & Contaminant Processing; Nutrients; Primary Production
Hirose, E., S. Hirabayashi, K. Hori, F. Kasai, and M. M. Watanabe. 2006. UV protection in the photosymbiotic ascidian Didemnum molle inhabiting different depths. Zoological Science 23:57-63. 2006 Japan Light; Primary Production
Hoogenboom, M. O., K. R. N. Anthony, and S. R. Connolly. 2006. Energetic cost of photoinhibition in corals. Marine Ecology Progress Series 313:12-Jan. 2006 Lab Study Light; Primary Production; Stony Coral
Jensen, L. T., E. Rosenqvist, and J. M. Aaslyng. 2006. A daylight climate chamber for testing greenhouse climate control strategies and calculating canopy carbon dioxide exchange. HortTechnology 16:191-198. 2006 CO2; Irrigation; Light; Primary Production
Kahn, A. E. and M. J. Durako. 2006. Thalassia testudinum seedling responses to changes in salinity and nitrogen levels. Journal of Experimental Marine Biology and Ecology 335:12-Jan. 2006 Florida Nutrients; Primary Production; Salinity; Seagrasses; Special Use Permitting
Lee, J. J. 2006. Algal symbiosis in larger foraminifera. Symbiosis 42:63-75. 2006 Cuba Field Study & Monitoring; Lab Study Algae; Cyanobacteria; Microorganisms; Nutrients; Ports & Harbors; Primary Production
Levy, O., Y. Achituv, Y. Z. Yacobi, N. Stambler, and Z. Dubinsky. 2006. The impact of spectral composition and light periodicity on the activity of two antioxidant enzymes (SOD and CAT) in the coral Favia favus. Journal of Experimental Marine Biology and Ecology 328:35-46. 2006 Lab Study Algae; Light; Primary Production; Zooxanthellae
Levy, O., Y. Achituv, Y. Z. Yacobi, Z. Dubinsky, and N. Stambler. 2006. Diel 'tuning' of coral metabolism: Physiological responses to light cues. Journal of Experimental Biology 209:273-283. 2006 Algae; Light; Primary Production; Stony Coral; Zooxanthellae
Levy, O., Z. Dubinsky, Y. Achituv, and J. Erez. 2006. Diurnal polyp expansion behavior in stony corals may enhance carbon availability for symbionts photosynthesis. Journal of Experimental Marine Biology and Ecology 333:11-Jan. 2006 Algae; Light; Plankton; Primary Production; Stony Coral; Zooxanthellae
Montagna, P., M. McCulloch, M. Taviani, C. Mazzoli, and B. Vendrell. 2006. Phosphorus in cold-water corals as a proxy for seawater nutrient chemistry. Science 312:1788-1791. 2006 Decision Support Frameworks & Tools Nutrients; Primary Production
Moya, A., S. Tambutte, E. Tambutte, D. Zoccola, N. Caminiti, and D. Allemand. 2006. Study of calcification during a daily cycle of the coral Stylophora pistillata: Implications for 'light-enhanced calcification'. Journal of Experimental Biology 209:3413-3419. 2006 Primary Production; Stony Coral
Olson, J. M. 2006. Photosynthesis in the Archean era. Photosynthesis Research 88:109-117. 2006 Australia; South Africa Cyanobacteria; Primary Production
Ramade, F. and H. Roche. 2006. Pollutant effects on coral reefs ecosystems [Effets des polluants sur les ecosystemes recifaux]. Revue d'Ecologie (La Terre et la Vie) 61:Mar-33. 2006 Global Algae; Complex Habitat & Resources; Discharges; Fertilizer & Pesticide Use; Finfish Harvest; Mangroves; Primary Production; Sediment; Stony Coral; Zooxanthellae
Ravindran, J. and C. Raghukumar. 2006. Pink-line syndrome, a physiological crisis in the scleractinian coral Porites lutea. Marine Biology 149:347-356. 2006 Index or Indicator CO2; Cyanobacteria; Microorganisms; Pathogens; Primary Production; Stony Coral; Zooxanthellae
Rodolfo-Metalpa, R., C. Richard, D. Allemand, and C. Ferrier-Pages. 2006. Growth and photosynthesis of two Mediterranean corals, Cladocora caespitosa and Oculina patagonica, under normal and elevated temperatures. Journal of Experimental Biology 209:4546-4556. 2006 Cuba Primary Production; Zooxanthellae
Rodriguez-Roman, A., X. Hernandez-Pech, P. E. Thome, S. Enriquez, and R. Iglesias-Prieto. 2006. Photosynthesis and light utilization in the Caribbean coral Montastraea faveolata recovering from a bleaching event. Limnology and Oceanography 51:2702-2710. 2006 South & Central America; Caribbean Algae; Light; Primary Production; Stony Coral
Saito, H. and K. Furuya. 2006. Endosymbiosis in microalgae with special attention to Noctiluca scintillans. Bulletin of the Plankton Society of Japan 53:14-21. 2006 Southeast Asia Lab Study Algae; Primary Production
Schneider, K. and J. Erez. 2006. The effect of carbonate chemistry on calcification and photosynthesis in the hermatypic coral Acropora eurystoma. Limnology and Oceanography 51:1284-1293. 2006 Lab Study CO2; Primary Production; Special Use Permitting; Stony Coral
Sinclair, D. J. and M. J. Risk. 2006. A numerical model of trace-element coprecipitation in a physicochemical calcification system: Application to coral biomineralization and trace-element 'vital effects'. Geochimica et Cosmochimica Acta 70:3855-3868. 2006 Model; Decision Support Frameworks & Tools Calcium Carbonate Deposition; CO2; Primary Production
Stanley, S. M. 2006. Influence of seawater chemistry on biomineralization throughout phanerozoic time: Paleontological and experimental evidence. Palaeogeography, Palaeoclimatology, Palaeoecology 232:214-236. 2006 Lab Study Algae; Calcium Carbonate Deposition; CO2; Primary Production; Sponges
Tentori, E. and D. Allemand. 2006. Light-enhanced calcification and dark decalcification in isolates of the soft coral Cladiella sp. during tissue recovery. Biological Bulletin 211:193-202. 2006 Lab Study Octocoral; Primary Production; Stony Coral; Zooxanthellae
Tice, M. M. and D. R. Lowe. 2006. The origin of carbonaceous matter in pre-3.0 Ga greenstone terrains: A review and new evidence from the 3.42 Ga Buck Reef Chert. Earth-Science Reviews 76:259-300. 2006 South Africa Review; Field Study & Monitoring; Model Primary Production; Sediment; Storms & Hurricanes
Titlyanov, E. A., T. V. Titlyanova, I. M. Yakovleva, and O. S. Sergeeva. 2006. Influence of winter and spring/summer algal communities on the growth and physiology of adjacent scleractinian corals. Botanica Marina 49:200-207. 2006 Japan Algae; Plankton; Primary Production; Stony Coral
Tribollet, A., C. Langdon, S. Golubic, and M. Atkinson. 2006. Endolithic microflora are major primary producers in dead carbonate substrates of Hawaiian coral reefs. Journal of Phycology 42:292-303. 2006 US Pacific & Hawaii Algae; Cyanobacteria; Microorganisms; Primary Production; Skeletal Coral; Stony Coral; Substrate; Turf Algae
Tribollet, A., M. J. Atkinson, and C. Langdon. 2006. Effects of elevated pCO2 on epilithic and endolithic metabolism of reef carbonates. Global Change Biology 12:2200-2208. 2006 US Pacific & Hawaii Lab Study Algae; CO2; Coralline Algae; Cyanobacteria; Microorganisms; Primary Production; Skeletal Coral; Stony Coral
Ulstrup, K. E., P. J. Ralph, A. W. D. Larkum, and M. Kuhl. 2006. Intra-colonial variability in light acclimation of zooxanthellae in coral tissues of Pocillopora damicornis. Marine Biology 149:1325-1335. 2006 Light; Primary Production; Stony Coral; Zooxanthellae
Uthicke, S. 2006. Photosynthetic efficiency and rapid light curves of sediment-biofilms along a water quality gradient in the Great Barrier Reef, Australia. Marine Ecology Progress Series 322:61-73. 2006 Australia Field Study & Monitoring; Lab Study; Index or Indicator Algae; Light; Nutrients; Primary Production; Sediment
Villanueva, R. D., H. T. Yap, and M. N. E. Montano. 2006. Intensive fish farming in the Philippines is detrimental to the reef-building coral Pocillopora damicornis. Marine Ecology Progress Series 316:165-174. 2006 Philippines Aquaculture; Nutrients; Primary Production; Sediment; Stony Coral; Substrate
Watanabe, A., H. Kayanne, H. Hata, S. Kudo, K. Nozaki, K. Kato, A. Negishi, Y. Ikeda, and H. Yamano. 2006. Analysis of the seawater CO2 system in the barrier reef-lagoon system of Palau using total alkalinity-dissolved inorganic carbon diagrams. Limnology and Oceanography 51:1614-1628. 2006 Palau CO2; Primary Production; Seawater Flow
Werner, U., P. Bird, C. Wild, T. Ferdelman, L. Polerecky, G. Eickert, R. Jonstone, O. Hoegh-Guldberg, and D. De Beer. 2006. Spatial patterns of aerobic and anaerobic mineralization rates and oxygen penetration dynamics in coral reef sediments. Marine Ecology Progress Series 309:93-105. 2006 Australia Primary Production; Sediment
Zhukova, N. V. and E. A. Titlyanov. 2006. Effect of light intensity on the fatty acid composition of dinoflagellates symbiotic with hermatypic corals. Botanica Marina 49:339-346. 2006 Hydrocoral; Light; Primary Production; Stony Coral; Zooxanthellae
Al-Horani, F. A. 2005. Effects of changing seawater temperature on photosynthesis and calcification in the scleractinian coral Galaxea fascicularis, measured with O2, Ca2+ and pH microsensors. Scientia Marina 69:347-354. 2005 Cuba CO2; Primary Production; Stony Coral
Al-Horani, F. A., T. Ferdelman, S. M. Al-Moghrabi, and D. De Beer. 2005. Spatial distribution of calcification and photosynthesis in the scleractinian coral Galaxea fascicularis. Coral Reefs 24:173-180. 2005 Primary Production; Stony Coral
Al-Horani, F., S. Al-Rousan, R. Manasrah, and M. Rasheed. 2005. Coral calcification: Use of radioactive isotopes and metabolic inhibitors to study the interactions with photosynthesis and respiration. Chemistry and Ecology 21:325-335. 2005 Lab Study Primary Production; Stony Coral
Anthony, K. R. N., M. O. Hoogenboom, and S. R. Connolly. 2005. Adaptive variation in coral geometry and the optimization of internal colony light climates. Functional Ecology 19:17-26. 2005 Field Study & Monitoring; Model Climate; Light; Primary Production; Stony Coral; Water Depth & Sea Level
Badran, M. I., M. Rasheed, R. Manasrah, and T. Al-Najjar. 2005. Nutrient flux fuels the summer primary productivity in the oligotrophic waters of the Gulf of Aqaba, Red Sea. Oceanologia 47:47-60. 2005 Model Light; Nutrients; Primary Production
Burghardt, I., J. Evertsen, G. Johnsen, and H. Wagele. 2005. Solar powered seaslugs - Mutualistic symbiosis of aeolid nudibranchia (Mollusca, Gastropoda, Opisthobranchia) with Symbiodinium. Symbiosis 38:227-250. 2005 Dive, Snorkeling, & Swimming Tourism; Housing; Light; Molluscs; Octocoral; Primary Production; Zooxanthellae
Castillo, K. D. and B. S. T. Helmuth. 2005. Influence of thermal history on the response of Montastraea annularis to short-term temperature exposure. Marine Biology 148:261-270. 2005 South & Central America; Belize; Honduras Primary Production; Stony Coral
Clavier, J., G. Boucher, L. Chauvaud, R. Fichez, and S. Chifflet. 2005. Benthic response to ammonium pulses in a tropical lagoon: Implications for coastal environmental processes. Journal of Experimental Marine Biology and Ecology 316:231-241. 2005 New Caledonia Light; Microorganisms; Nutrients; Primary Production; Sediment; Wastewater Discharge
Cox, G. and A. Salih. 2005. Fluorescence lifetime imaging of symbionts and fluorescent proteins in reef corals. Pages 162-170 in Progress in Biomedical Optics and Imaging - Proceedings of SPIE. 2005 Index or Indicator Algae; Primary Production; Stony Coral; Zooxanthellae
Ferrier-Pages, C., F. Houlbreque, E. Wyse, C. Richard, D. Allemand, and F. Boisson. 2005. Bioaccumulation of zinc in the scleractinian coral Stylophora pistillata. Coral Reefs 24:636-645. 2005 Cuba Nutrients; Primary Production; Stony Coral; Zooxanthellae
Furnas, M., A. Mitchell, M. Skuza, and J. Brodie. 2005. In the other 90%: Phytoplankton responses to enhanced nutrient availability in the Great Barrier Reef Lagoon. Marine Pollution Bulletin 51:253-265. 2005 Australia Algae; Microorganisms; Nutrients; Plankton; Primary Production; Seagrasses; Sediment
Gischler, E. and W. Oschmann. 2005. Historical climate variation in Belize (Central America) as recorded in scleractinian coral skeletons. Palaios 20:159-174. 2005 South & Central America; US East Coast (NC, SC, GA); Belize GIS & Maps Climate; CO2; Primary Production; Sediment; Stony Coral; Surface & Groundwater Flow
Goulet, T. L., C. B. Cook, and D. Goulet. 2005. Effect of short-term exposure to elevated temperatures and light levels on photosynthesis of different host-symbiont combinations in the Aiptasia pallidal Symbiodinium symbiosis. Limnology and Oceanography 50:1490-1498. 2005 Florida; Bermuda Lab Study Algae; Anemones & Zooanthids; Light; Primary Production; Zooxanthellae
Harrington, L., K. Fabricius, G. Eaglesham, and A. Negri. 2005. Synergistic effects of diuron and sedimentation on photosynthesis and survival of crustose coralline algae. Marine Pollution Bulletin 51:415-427. 2005 Australia Algae; Coralline Algae; Nutrients; Primary Production; Sediment
Hernando, M.P., G.A. Ferreyra. 2005. The effects of UV radiation on photosynthesis in an Antarctic diatom (Thalassiosira sp.): Does vertical mixing matter? Journal of Experimental Marine Biology and Ecology 325:35-45. 2005 Cuba Field Study & Monitoring; Lab Study Algae; Light; Plankton; Primary Production
Jones, R. 2005. The ecotoxicological effects of Photosystem II herbicides on corals. Marine Pollution Bulletin 51:495-506. 2005 Review Agriculture; Algae; Fertilizer & Pesticide Use; Primary Production
Kayanne, H., H. Hata, S. Kudo, H. Yamano, A. Watanabe, Y. Ikeda, K. Nozaki, K. Kato, A. Negishi, and H. Saito. 2005. Seasonal and bleaching-induced changes in coral reef metabolism and CO2 flux. Global Biogeochemical Cycles 19:11-Jan. 2005 Japan; Palau Field Study & Monitoring CO2; Primary Production
Knap, A. H., S. C. Wyers, R. E. Dodge, T. D. Sleeter, H. R. Frith, S. R. Smith, and C. B. Cook. 2005. The effects of chemically and physically dispersed oil on the brain coral diploria strigosa (dana)-a summary review. Page 2303 in 2005 International Oil Spill Conference, IOSC 2005. 2005 Bermuda Review; Field Study & Monitoring; Lab Study Petroleum Spills; Primary Production; Stony Coral
Langdon, C. and M. J. Atkinson. 2005. Effect of elevated pCO2 on photosynthesis and calcification of corals and interactions with seasonal change in temperature/ irradiance and nutrient enrichment. Journal of Geophysical Research C: Oceans 110:16-Jan. 2005 Model Calcium Carbonate Deposition; CO2; Light; Nutrients; Primary Production
Leletkin, V. A. 2005. Nitrogen and photosynthetic function of hermatypic corals. Oxygen exchange of Stylophora pistillata coral under artificial feeding. Zhurnal Obshchei Biologii 66:164-169. 2005 Algae; Nutrients; Primary Production; Zooxanthellae
Lin, Q. and I. A. Mendelssohn. 2005. Dispersants as countermeasures in nearshore oil spills for coastal habitat protection. Pages 10781-10785 in 2005 International Oil Spill Conference, IOSC 2005. 2005 Lobster, Crab, & Shrimp; Petroleum Spills; Primary Production; Wetlands
Lugomela, C., E. Soderback, and M. Bjork. 2005. Photosynthesis rates in cyanobacteria-dominated sub-tidal biofilms near Zanzibar, Tanzania. Estuarine Coastal and Shelf Science 63:439-446. 2005 Tanzania Index or Indicator Cyanobacteria; Microorganisms; Primary Production
McClanahan, T. R. and N. A. J. Graham. 2005. Recovery trajectories of coral reef fish assemblages within Kenyan marine protected areas. Marine Ecology Progress Series 294:241-248. 2005 Kenya Algae; Fish; Marine Protected Areas; Primary Production
McMahon, K., S. B. Nash, G. Eaglesham, J. F. Muller, N. C. Duke, and S. Winderlich. 2005. Herbicide contamination and the potential impact to seagrass meadows in Hervey Bay, Queensland, Australia. Marine Pollution Bulletin 51:325-334. 2005 Australia Fertilizer & Pesticide Use; Primary Production; Seagrasses; Sediment; Surface & Groundwater Flow
Nakamura, T., R. Van Woesik, and H. Yamasaki. 2005. Photoinhibition of photosynthesis is reduced by water flow in the reef-building coral Acropora digitifera. Marine Ecology Progress Series 301:109-118. 2005 Field Study & Monitoring; Lab Study Algae; Light; Primary Production; Seawater Flow; Stony Coral
Negri, A., C. Vollhardt, C. Humphrey, A. Heyward, R. Jones, G. Eaglesham, and K. Fabricius. 2005. Effects of the herbicide diuron on the early life history stages of coral. Marine Pollution Bulletin 51:370-383. 2005 Lab Study Fertilizer & Pesticide Use; Primary Production; Stony Coral
Omata, T., A. Suzuki, H. Kawahat, and M. Okamoto. 2005. Annual fluctuation in the stable carbon isotope ratio of coral skeletons: The relative intensities of kinetic and metabolic isotope effects. Geochimica et Cosmochimica Acta 69:3007-3016. 2005 Model Climate; Primary Production; Salinity; Stony Coral
Raja, R., P. K. Saraswati, K. Rogers, and K. Iwao. 2005. Magnesium and strontium compositions of recent symbiont-bearing benthic foraminifera. Marine Micropaleontology 58:31-44. 2005 Indian Ocean; India; Japan Climate; Nutrients; Plankton; Primary Production
Ralph, P. J. and R. Gademann. 2005. Rapid light curves: A powerful tool to assess photosynthetic activity. Aquatic Botany 82:222-237. 2005 Model; Decision Support Frameworks & Tools Primary Production; Seagrasses
Ralph, P. J., U. Schreiber, R. Gademann, M. Kuhl, and A. W. D. Larkum. 2005. Coral photobiology studied with a new imaging pulse amplitude modulated fluorometer. Journal of Phycology 41:335-342. 2005 Light; Primary Production; Stony Coral
Shick, J. M., C. Ferrier-Pages, R. Grover, and D. Allemand. 2005. Effects of starvation, ammonium concentration, and photosynthesis on the UV-dependent accumulation of mycosporine-like amino acids (MAAs) in the coral Stylophora pistillata. Marine Ecology Progress Series 295:135-156. 2005 Light; Primary Production; Special Use Permitting; Stony Coral; Sunscreen Use; Zooxanthellae
Smith, D. J., D. J. Suggett, and N. R. Baker. 2005. Is photoinhibition of zooxanthellae photosynthesis the primary cause of thermal bleaching in corals? Global Change Biology 11:11-Jan. 2005 Review Primary Production; Zooxanthellae
Sunda, W. G., R. W. Litaker, D. R. Hardison, and P. A. Tester. 2005. Dimethylsulfoniopropionate (DMSP) and its relation to algal pigments in diverse waters of the Belize coastal lagoon and barrier reef system. Marine Ecology Progress Series 287:22-Nov. 2005 South & Central America; Belize Index or Indicator Cyanobacteria; Mangroves; Microorganisms; Nutrients; Plankton; Primary Production
Swart, P. K., A. Szmant, J. W. Porter, R. E. Dodge, J. I. Tougas, and J. R. Southam. 2005. The isotopic composition of respired carbon dioxide in scleractinian corals: Implications for cycling of organic carbon in corals. Geochimica et Cosmochimica Acta 69:1495-1509. 2005 Florida; Cuba CO2; Primary Production; Stony Coral; Zooxanthellae
Ulstrup, K. E., R. Hill, and P. J. Ralph. 2005. Photosynthetic impact of hypoxia on in hospite zooxanthellae in the scleractinian coral Pocillopora damicornis. Marine Ecology Progress Series 286:125-132. 2005 Primary Production; Seawater Flow; Stony Coral; Zooxanthellae
Wild, C., M. Rasheed, C. Jantzen, P. Cook, U. Struck, M. Huettel, and A. Boetius. 2005. Benthic metabolism and degradation of natural particulate organic matter in carbonate and silicate reef sands of the northern Red Sea. Marine Ecology Progress Series 298:69-78. 2005 Primary Production; Sediment; Zooxanthellae
Yanez-Arancibia, A. and J. W. Day. 2005. Environmental sub-regions in the Gulf of Mexico coastal zone: The ecosystem approach as an integrated management tool. Ocean and Coastal Management 47:727-757. 2005 Global; South & Central America; Florida; Caribbean; Mexico Decision Support Frameworks & Tools Apex Fish Predators; Cultural Policies; Discharges; Primary Production; Surface & Groundwater Flow; Wetlands
[No author name available]. 2004. Proceedings of SPIE -