Jump to main content or area navigation.

Contact Us

ReefLink Database

Special Use Permitting

Special Use Permitting

Special use permitting is a documentation mechanism to allow activities that might otherwise be prohibited (e.g,, collection of species for scientific research in a protected area).

CMap

Biological Addition refers to anthropogenic inputs of a biological nature into the reef ecosystem, including artificial habitat, domestic animal waste, supplemental feeding, and escape or release of non-native species. Biological Harvest is the collection of living things from the ecosystem for recreation, consumption, or sale of marine products. Boating activities include movement in coastal waters and into ports that can lead to anchor drops or vessel groundings, or damage from trawling and other fishing gear. Boating Regulations are restrictions placed on boating activities to promote safety for boaters and the natural environment, and can include mooring buoys, registration and licensing, and speed limits. Civil Engineering and Construction specializes in the design and construction of infrastructure, including buildings and homes, roads, utility lines, and ports. Contact Uses, such as biological additions, physical damage, and biological harvesting, are activities in which humans create pressures through direct contact with the ecosystem. Cultural services are the nonmaterial benefits people obtain from ecosystems through spiritual enrichment, cognitive development, recreational opportunities, aesthetic experiences, sense of place, and educational and research opportunities. Culture sectors contribute to the social, emotional, and intellectual well-being of the community. Designated uses are a state's concise statements of its management objectives and expectations for each of the individual surface waters under its jurisdiction. Dredging regulations are decisions or policies to control the location or intensity of physically damaging activities such as dredging, draining, or filling. Dredging is the process of excavating material from an area to maintain ship channels and harbors for safe navigation. Ecosystem services are the benefits people obtain from ecosystems . Fishing is the activity of catching fish for recreational, commercial, or artesanal purposes using any of a variety of fishing gear, including nets, spear guns, or hook and line. Fish are cold-blooded aquatic vertebrates that breathe through gills and usually have scales. Fishing & harvesting management controls the activities which harvest fish and invertebrates, including commercial and recreational fishing. The Fishing Sector includes the harvesting of fish for food and recreation. The Food and Raw Materials sector includes groups that harvest natural resources from the earth, including agriculture, aquaculture, fishing, forestry, mining, and the oil and gas industry. An Invertebrate is any animal that lacks a backbone. Marine Protected Areas (MPAs) are Any area of the marine environment that has been reserved by federal, state, tribal, territorial, or local laws or regulations to provide lasting protection for part or all of the natural and cultural resources therein. The Reef Ecosystem includes a suite of abiotic variables that form the physical and chemical environment. Physical Damage to reef habitat and wetlands can occur from vessel groundings, dredging, trampling, boat movement, anchor drops, trawling, and fishing gear. Provisioning services are the products or ecosystem goods obtained from ecosystems, including seafood, genetic and biochemical resources, pharmaceuticals, ornamental resources, and water resources. The state of the Reef Ecosystem is the condition, in terms of quantity and quality, of the abiotic and biotic components including physical, chemical, and biological variables. Reef Habitat is the abundance, distribution, and condition of the benthic components of the reef ecosystem. Reef Inhabitants are all of the motile components of the reef ecosystem, including fish, invertebrates, marine reptiles and mammals, and are quantified by their abundance, distribution, and condition. Reef Life is the abundance, distribution, and condition of the biological components of the coral reef ecosystem. Regulating Services are benefits obtained from ecosystem processes that regulate the environment, including erosion regulation, natural hazard regulation, and climate regulation. Resource use management pertains to responses to regulate or limit contact activities that may directly impact coastal species through harvesting or physical damage. Responses are actions taken by groups or individuals in society and government to prevent, compensate, ameliorate or adapt to changes in Ecosystem Services or their perceived value. Socio-Economic Drivers include the sectors that fulfill human needs for Food & Raw Materials, Water, Shelter, Health, Culture, and Security, and the Infrastructure that supports the sectors. Special use permitting is a documentation mechanism to allow activities that might otherwise be prohibited (e.g,, collection of species for scientific research in a protected area). Supporting services are ecological processes that indirectly benefit humans by maintaining a functional ecosystem for the production of other ecosystem goods and services. Tourism & Recreation sectors operate facilities and provide services for the varied cultural, entertainment, and recreational interests of residents and tourists. Trampling occurs when humans walk on, kick, bump into, or touch corals. The Transportation Sector involves comprises all modes of transportation (Aviation, Maritime, Mass Transit, Highway, Freight Rail, and Pipeline) The Transportation Systems Sector is segmented into six key subsectors, or modes, which operate independently within both a regulated and non-regulated environment, yet are also highly interdependent. A wetland is an area of land whose soil is saturated with moisture either permanently or seasonally.

CMap Description

A change in the provision of ecosystem services, or a desire to improve provision of ecosystem services, may elicit responses to reduce or manage contact uses that include harvesting or physical damage to reef species. Permitting for special uses, such as collection of species for scientific research, may be allowed. Many of the same socio-economic sectors that create pressures through contact uses benefit from goods and services provided by the reef, including recreational opportunities and seafood.

Citations

Citation Year Study Location Study Type Database Topics
2011. Coastal Capital Literature Review: Economic Valuation of Coastal and Marine Resources in Jamaica. World Resource Institute, Washington, D.C. (USA). 2011 Jamaica Review; Decision Support Frameworks & Tools Banks, Credit, & Securities; Coastal Development; Cultural Policies; Cultural Protections; Finfish Harvest; Fish; Marine Protected Areas; Monetary Valuation; Social Organizations; Special Use Permitting; Storms & Hurricanes; Tourism & Recreation; Tourism & Recreation Policies; Valuation
Bertucci, A; Tambutte, S; Supuran, CT; Allemand, D; Zoccola, D. 2011. A New Coral Carbonic Anhydrase in Stylophora pistillata. Marine Biotechnology 13:992-1002. 2011 Anemones & Zooanthids; Calcium Carbonate Deposition; Primary Production; Special Use Permitting; Stony Coral
Beukers-Stewart, BD; Beukers-Stewart, JS; Jones, GP. 2011. Behavioural and developmental responses of predatory coral reef fish to variation in the abundance of prey. Coral Reefs 30:855-864. 2011 Apex Fish Predators; Complex Habitat & Resources; Fish; Special Use Permitting; Stony Coral
Blackwood, JC; Hastings, A; Mumby, PJ. 2011. A model-based approach to determine the long-term effects of multiple interacting stressors on coral reefs. Ecological Applications 21:2722-2733. 2011 South & Central America; Caribbean Model Algae; Complex Habitat & Resources; Finfish Harvest; Fishing & Harvesting Management; Fishing Sector; Ocean Acidity; Sea Temperatures; Special Use Permitting; Storms & Hurricanes; Water Depth & Sea Level; Wetland & Reef Restoration
Brady, AK; Snyder, KA; Vize, PD. 2011. Circadian Cycles of Gene Expression in the Coral, Acropora millepora. PLoS One 6. 2011 Special Use Permitting; Stony Coral; Zooxanthellae
Christensen, V., J. Steenbeek, and P. Failler. 2011. A combined ecosystem and value chain modeling approach for evaluating societal cost and benefit of fishing. Ecological Modelling 222:857-864. 2011 Model; Decision Support Frameworks & Tools Finfish Harvest; Fishing Sector; Special Use Permitting
Dale, JJ; Wallsgrove, NJ; Popp, BN; Holland, KN. 2011. Nursery habitat use and foraging ecology of the brown stingray Dasyatis lata determined from stomach contents, bulk and amino acid stable isotopes. Marine Ecology Progress Series 433:221-236. 2011 US Pacific & Hawaii Apex Fish Predators; Nutrients; Special Use Permitting
Detournay, O; Weis, VM. 2011. Role of the Sphingosine Rheostat in the Regulation of Cnidarian-Dinoflagellate Symbioses. Biological Bulletin 221:261-269. 2011 Cuba Anemones & Zooanthids; Special Use Permitting
Findlay, HS; Wood, HL; Kendall, MA; Spicer, JI; Twitchett, RJ; Widdicombe, S. 2011. Comparing the impact of high CO(2) on calcium carbonate structures in different marine organisms. Marine Biology Research 7:565-575. 2011 Global Calcium Carbonate Deposition; CO2; Echinoderms; Molluscs; Ocean Acidity; Special Use Permitting
Forrester, G; Harmon, L; Helyer, J; Holden, W; Karis, R. 2011. Experimental evidence for density-dependent reproductive output in a coral reef fish. Population Ecology 53:155-163. 2011 Field Study & Monitoring Fish; Special Use Permitting
Fukuda, S; Suzuki, I; Hama, T; Shiraiwa, Y. 2011. Compensatory response of the unicellular-calcifying alga Emiliania huxleyi (Coccolithophoridales, Haptophyta) to ocean acidification. Journal of Oceanography 67:17-25. 2011 Cuba Algae; CO2; Ocean Acidity; Plankton; Primary Production; Special Use Permitting
Godinot, C; Grover, R; Allemand, D; Ferrier-Pages, C. 2011. High phosphate uptake requirements of the scleractinian coral Stylophora pistillata. Journal of Experimental Biology 214:2749-2754. 2011 Decision Support Frameworks & Tools Algae; Nutrients; Special Use Permitting; Stony Coral; Zooxanthellae
Grkovic, T; Whitson, EL; Rabe, DC; Gardella, RS; Bottaro, DP; Linehan, WM; McMahon, JB; Gustafson, KR; McKee, TC. 2011. Identification and evaluation of soft coral diterpenes as inhibitors of HIF-2 alpha induced gene expression. Bioorganic & Medicinal Chemistry Letters 21:2113-2115. 2011 Octocoral; Pathogens; Pharmaceuticals & Cosmetics Sources; Special Use Permitting
Harborne, AR; Mumby, PJ; Kennedy, EV; Ferrari, R. 2011. Biotic and multi-scale abiotic controls of habitat quality: their effect on coral-reef fishes. Marine Ecology Progress Series 437:201-214. 2011 South & Central America; Belize; Caribbean Field Study & Monitoring; Model Fish; Small Herbivorous Fish; Special Use Permitting; Stony Coral
Hargreaves-Allen, V; Mourato, S; Milner-Gulland, EJ. 2011. A Global Evaluation of Coral Reef Management Performance: Are MPAs Producing Conservation and Socio-Economic Improvements? Environmental Management 47:684-700. 2011 Global; Philippines Decision Support Frameworks & Tools Fishing Sector; Marine Protected Areas; Special Use Permitting; Tourism & Recreation
Harmata, KL; Blackstone, NW. 2011. Reactive Oxygen Species and the Regulation of Hyperproliferation in a Colonial Hydroid. Physiological And Biochemical Zoology 84:481-493. 2011 China Discharge Limitations; Discharges; Special Use Permitting; Stony Coral
Hixon, MA. 2011. 60 Years Of Coral Reef Fish Ecology: Past, Present, Future. Bulletin of Marine Science 87:727-765. 2011 Cuba Model Finfish Harvest; Fish; Invasive Species; Marine Protected Areas; Special Use Permitting
Hur, SP; Takeuchi, Y; Esaka, Y; Nina, W; Park, YJ; Kang, HC; Jeong, HB; Lee, YD; Kim, SJ; Takemura, A. 2011. Diurnal expression patterns of neurohypophysial hormone genes in the brain of the threespot wrasse Halichoeres trimaculatus. Comparative Biochemistry and Physiology A - Molecular and Integrative Physiology 158:490-497. 2011 Planktivorous Fish; Special Use Permitting
Kayal, M; Lenihan, HS; Pau, C; Penin, L; Adjeroud, M. 2011. Associational refuges among corals mediate impacts of a crown-of-thorns starfish Acanthaster planci outbreak. Coral Reefs 30:827-837. 2011 Field Study & Monitoring; Model Complex Habitat & Resources; Seastars; Special Use Permitting; Stony Coral
Kvitt, H; Rosenfeld, H; Zandbank, K; Tchernov, D. 2011. Regulation of Apoptotic Pathways by Stylophora pistillata (Anthozoa, Pocilloporidae) to Survive Thermal Stress and Bleaching. PLoS One 6. 2011 Anemones & Zooanthids; Climate; Special Use Permitting; Stony Coral
Leggat, W; Seneca, F; Wasmund, K; Ukani, L; Yellowlees, D; Ainsworth, TD. 2011. Differential Responses of the Coral Host and Their Algal Symbiont to Thermal Stress. PLoS One 6. 2011 Hydrocoral; Special Use Permitting; Stony Coral
Lin, YC; Huang, SY; Jean, YH; Chen, WF; Sung, CS; Kao, ES; Wang, HM; Chakraborty, C; Duh, CY; Wen, ZH. 2011. Intrathecal lemnalol, a natural marine compound obtained from Formosan soft coral, attenuates nociceptive responses and the activity of spinal glial cells in neuropathic rats. Behavioural Pharmacology 22:739-750. 2011 Model Octocoral; Special Use Permitting
McCaffrey, K; Hawkins, MB; Godwin, J. 2011. Sexual Phenotype Differences in zic2 mRNA Abundance in the Preoptic Area of a Protogynous Teleost, Thalassoma bifasciatum. PLoS One 6. 2011 Field Study & Monitoring; Model Planktivorous Fish; Special Use Permitting
Meyer, E; Aglyamova, GV; Matz, MV. 2011. Profiling gene expression responses of coral larvae (Acropora millepora) to elevated temperature and settlement inducers using a novel RNA-Seq procedure. Molecular Ecology 20:3599-3616. 2011 Global; Europe Decision Support Frameworks & Tools Algae; Climate; Coralline Algae; Special Use Permitting; Stony Coral
Mills, M; Jupiter, SD; Pressey, RL; Ban, NC; Comley, J. 2011. Incorporating Effectiveness of Community-Based Management in a National Marine Gap Analysis for Fiji. Conservation Biology 25:1155-1164. 2011 Fiji; Philippines Fishing Sector; Mangroves; Marine Protected Areas; Resource Use Management; Special Use Permitting
Munday, PL; Gagliano, M; Donelson, JM; Dixson, DL; Thorrold, SR. 2011. Ocean acidification does not affect the early life history development of a tropical marine fish. Marine Ecology Progress Series 423:211-221. 2011 Calcium Carbonate Deposition; Climate; CO2; Fish; Ocean Acidity; Small Herbivorous Fish; Special Use Permitting
Munday, PL; Hernaman, V; Dixson, DL; Thorrold, SR. 2011. Effect of ocean acidification on otolith development in larvae of a tropical marine fish. Biogeosciences 8:1631-1641. 2011 Calcium Carbonate Deposition; Climate; CO2; Fish; Ocean Acidity; Special Use Permitting
Nevitt, GA. 2011. The Neuroecology of Dimethyl Sulfide: A Global-Climate Regulator Turned Marine Infochemical. Integrative And Comparative Biology 51:819-825. 2011 Global Lab Study Algae; Climate; Marine Birds; Plankton; Special Use Permitting
Palmer, CV; Bythell, JC; Willis, BL. 2011. A comparative study of phenoloxidase activity in diseased and bleached colonies of the coral Acropora millepora. Developmental and Comparative Immunology 35:1096-1099. 2011 US Pacific & Hawaii Pathogens; Special Use Permitting; Stony Coral
Pantile, R; Webster, N. 2011. Strict thermal threshold identified by quantitative PCR in the sponge Rhopaloeides odorabile. Marine Ecology Progress Series 431:97-105. 2011 Australia Climate; Special Use Permitting; Sponges
Peng, SE; Chen, WNU; Chen, HK; Lu, CY; Mayfield, AB; Fang, LS; Chen, CS. 2011. Lipid bodies in coral-dinoflagellate endosymbiosis: Proteomic and ultrastructural studies. Proteomics 11:3540-3555. 2011 Cleaner & Solvent Use; Special Use Permitting; Stony Coral; Zooxanthellae
Pernice, M; Dunn, SR; Miard, T; Dufour, S; Dove, S; Hoegh-Guldberg, O. 2011. Regulation of Apoptotic Mediators Reveals Dynamic Responses to Thermal Stress in the Reef Building Coral Acropora millepora. PLoS One 6. 2011 Global; Cuba Model Anemones & Zooanthids; Climate; Special Use Permitting; Stony Coral
Perry, RI. 2011. Potential impacts of climate change on marine wild capture fisheries: an update. Journal of Agricultural Science 149:63-75. 2011 Global; US Pacific & Hawaii; US East Coast (NC, SC, GA) Model Climate; Finfish Harvest; Fishing Sector; Ocean Acidity; Plankton; Primary Production; Special Use Permitting
Rosendo, S; Brown, K; Joubert, A; Jiddawi, N; Mechisso, M. 2011. A clash of values and approaches: A case study of marine protected area planning in Mozambique. Ocean and Coastal Management 54:55-65. 2011 Global; Mozambique Decision Support Frameworks & Tools Climate; Fishing Sector; Marine Protected Areas; Special Use Permitting; Tourism & Recreation
Rosic, NN; Pernice, M; Dove, S; Dunn, S; Hoegh-Guldberg, O. 2011. Gene expression profiles of cytosolic heat shock proteins Hsp70 and Hsp90 from symbiotic dinoflagellates in response to thermal stress: possible implications for coral bleaching. Cell Stress & Chaperones 16:69-80. 2011 Climate; Collaboration & Partnering; Sea Temperatures; Special Use Permitting; Stony Coral
Scholte, P; Al-Okaishi, A; Suleyman, AS. 2011. When conservation precedes development: a case study of the opening up of the Socotra archipelago, Yemen. ORYX 45:401-410. 2011 Indian Ocean; India Decision Support Frameworks & Tools Finfish Harvest; Landscape Conservation & Restoration; Landuse Management; Permitting & Zoning; Resource Use Management; Road Construction & Maintenance; Special Use Permitting
Simon, T; Pinheiro, HT; Joyeux, JC. 2011. Target fishes on artificial reefs: Evidences of impacts over nearby natural environments. Science of the Total Environment 409:4579-4584. 2011 Artificial Habitat; Commercial Fisheries; Fish; Fishing & Harvesting Management; Fishing Sector; Nutrients; Piscivorous Fish; Recreational Fishing; Special Use Permitting; Tourism & Recreation
Sjoo, GL; Mork, E; Andersson, S; Melander, I. 2011. Differences in top-down and bottom-up regulation of macroalgal communities between a reef crest and back reef habitat in Zanzibar. Estuarine Coastal and Shelf Science 91:511-518. 2011 South & Central America; Tanzania; Caribbean Algae; Complex Habitat & Resources; Nutrients; Primary Production; Special Use Permitting
Torres-Pratts, H; Lado-Insua, T; Rhyne, AL; Rodriguez-Matos, L; Schizas, NV. 2011. Two distinct, geographically overlapping lineages of the corallimorpharian Ricordea florida (Cnidaria: Hexacorallia: Ricordeidae). Coral Reefs 30:391-396. 2011 South & Central America; Florida; Puerto Rico; Caribbean Aquarium & Pet Trade; Aquarium Stock; Fishing Sector; Special Use Permitting
Tyler, EHM; Manica, A; Jiddawi, N; Speight, MR. 2011. A role for partially protected areas on coral reefs: maintaining fish diversity? Aquatic Conservation: Marine and Freshwater Ecosystems 21:231-238. 2011 Tanzania Finfish Harvest; Fish; Fishing Sector; Marine Protected Areas; Special Use Permitting; Trawling & Fishing Gear Damage
Ulstrup, KE; Kuhl, M; van Oppen, MJH; Cooper, TF; Ralph, PJ. 2011. Variation in photosynthesis and respiration in geographically distinct populations of two reef-building coral species. Aquatic Biology 12:241-248. 2011 Australia Algae; Climate; Primary Production; Special Use Permitting; Stony Coral; Zooxanthellae
Wang, JT; Meng, PJ; Sampayo, E; Tang, SL; Chen, CA. 2011. Photosystem II breakdown induced by reactive oxygen species in freshly-isolated Symbiodinium from Montipora (Scleractinia; Acroporidae). Marine Ecology Progress Series 422:51-62. 2011 Index or Indicator Algae; Climate; Special Use Permitting; Stony Coral; Zooxanthellae
Wei, WC; Lin, SY; Chen, YJ; Wen, CC; Huang, CY; Palanisamy, A; Yang, NS; Sheu, JH. 2011. Topical application of marine briarane-type diterpenes effectively inhibits 12-O-tetradecanoylphorbol-13-acetate-induced inflammation and dermatitis in murine skin. Journal of Biomedical Science 18. 2011 China Index or Indicator Octocoral; Pathogens; Special Use Permitting
2010. MS4 Permit Improvement Guide. 833-R-10-001, US Environmental Protection Agency Office of Water. 2010 Discharge Limitations; Discharges; Non-point Source Runoff; Schools & Colleges; Special Use Permitting; Surface & Groundwater Flow
A. V. Borges and N. Gypens. 2010. Carbonate chemistry in the coastal zone responds more strongly to eutrophication than to ocean acidification. Limnology and Oceanography 55:346-353. 2010 Model Carbon Storage & Cycling; CO2; Nutrients; Ocean Acidity; Primary Production; Special Use Permitting; Surface & Groundwater Flow
Aburto-Oropeza, O., G. Paredes, I. Mascarenas-Osorio, and E. Sala. 2010. Climatic influence on reef fish recruitment and fisheries. Marine Ecology Progress Series 410:283-287. 2010 Field Study & Monitoring; Index or Indicator Climate; Fish; Fishing & Harvesting Management; Fishing Sector; Piscivorous Fish; Special Use Permitting
Ang, T. Z. and A. Manica. 2010. Unavoidable limits on group size in a body size-based linear hierarchy. Behavioral Ecology 21:819-825. 2010 Fish; Special Use Permitting
Arbuatti, A. and P. Lucidi. 2010. Poisonous ornamental fishes on free sale. Survey on envenomations by Pterois volitans. Sanitary and legislative aspects with reference to the Italian current regulations about dangerous animals. Veterinaria 24:37-41. 2010 Field Study & Monitoring Aquarium & Pet Trade; Aquarium Stock; Special Use Permitting
Bridge, D., A. G. Theofiles, R. L. Holler, E. Marcinkevicius, R. E. Steele, and D. E. Martinez. 2010. FoxO and Stress Responses in the Cnidarian Hydra vulgaris. PLoS One 5:e11686. 2010 Special Use Permitting; Sponges
Carpenter, L. W., M. R. Patterson, and E. S. Bromage. 2010. Water flow influences the spatiotemporal distribution of heat shock protein 70 within colonies of the scleractinian coral Montastrea annularis (Ellis and Solander, 1786) following heat stress: Implications for coral bleaching. Journal of Experimental Marine Biology and Ecology 387:52-59. 2010 Seawater Flow; Special Use Permitting; Stony Coral; Surface & Groundwater Flow
Clarke, P. and S. D. Jupiter. 2010. Law, custom and community-based natural resource management in Kubulau District (Fiji). Environmental Conservation 37:98-106. 2010 Fiji Resource Use Management; Special Use Permitting
Haisfield, K. M., H. E. Fox, S. Yen, S. Mangubhai, and P. J. Mous. 2010. An ounce of prevention: cost-effectiveness of coral reef rehabilitation relative to enforcement. Conservation Letters 3:243-250. 2010 Southeast Asia; Indonesia Field Study & Monitoring; Model Artificial Habitat; Finfish Harvest; Fishing Sector; Marine Protected Areas; Skeletal Coral; Special Use Permitting; Tourism & Recreation
Harrison, P. A., M. Vandewalle, M. T. Sykes, P. M. Berry, R. Bugter, F. de Bello, C. K. Feld, U. Grandin, R. Harrington, J. R. Haslett, R. H. G. Jongman, G. W. Luck, P. M. da Silva, M. Moora, J. Settele, J. P. Sousa, and M. Zobel. 2010. Identifying and prioritising services in European terrestrial and freshwater ecosystems. Biodiversity and Conservation 19:2791-2821. 2010 Europe Review Agriculture; Biochemical & Genetic Resources; Biomedical Research Policies; Climate; Climate Regulation; Cultural Policies; Cultural Services; Existence Value & Sense of Place; Fishing Sector; Forestry; Non-Monetary Valuation; Pathogens; Pharmaceuticals & Cosmetics; Provisioning Services; Recreational Opportunities; Regulating Services; Seawater Flow; Special Use Permitting; Surface & Groundwater Flow; Tourism & Recreation; Tourism & Recreation Policies; Wetlands
Hastings, P. A. and G. R. Galland. 2010. Ontogeny of microhabitat use and two-step recruitment in a specialist reef fish, the Browncheek Blenny (Chaenopsidae). Coral Reefs 29:155-164. 2010 Plankton; Special Use Permitting
Hoogenboom, M., R. Rodolfo-Metalpa, and C. Ferrier-Pages. 2010. Co-variation between autotrophy and heterotrophy in the Mediterranean coral Cladocora caespitosa. Journal of Experimental Biology 213:2399-2409. 2010 Cuba Nutrients; Primary Production; Special Use Permitting; Stony Coral
Huang, C. Y., J. H. Su, Y. C. Liu, Z. H. Wen, C. H. Hsu, M. Y. Chiang, and J. H. Sheu. 2010. Oppositane-Type Sesquiterpenoids from the Formosan Soft Coral Sinularia leptoclados. Bulletin of the Chemical Society of Japan 83:678-682. 2010 Octocoral; Pharmaceuticals & Cosmetics Sources; Special Use Permitting
Iwata, E., Y. Nagai, and H. Sasaki. 2010. Social rank modulates brain arginine vasotocin immunoreactivity in false clown anemonefish (Amphiprion ocellaris). Fish Physiology and Biochemistry 36:337-345. 2010 Index or Indicator Anemones & Zooanthids; Fish; Special Use Permitting
Jackson, D. J., V. Thiel, and G. Worheide. 2010. An evolutionary fast-track to biocalcification. Geobiology 8:191-196. 2010 Calcium Carbonate Deposition; Microorganisms; Special Use Permitting; Sponges
Jordan, S. J., S. E. Hayes, D. Yoskowitz, L. S. Smith, J. K. Summers, M. Russell, and W. H. Benson. 2010. Accounting for natural resources and environmental sustainability: linking ecosystem services to human well-being. Environmental Science and Technology [inpress]. 2010 Index or Indicator Special Use Permitting
Kellner, J. B., S. Y. Litvin, A. Hastings, F. Micheli, and P. J. Mumby. 2010. Disentangling trophic interactions inside a Caribbean marine reserve. Ecological Applications 20:1979-1992. 2010 South & Central America; Bahamas; Caribbean Field Study & Monitoring; Model Corallivorous Fish; Finfish Harvest; Fish; Large Herbivorous Fish; Marine Protected Areas; Piscivorous Fish; Small Herbivorous Fish; Special Use Permitting
Kopp, D., Y. Bouchon-Navaro, M. Louis, D. Mouillot, and C. Bouchon. 2010. Herbivorous fishes and the potential of Caribbean marine reserves to preserve coral reef ecosystems. Aquatic Conservation: Marine and Freshwater Ecosystems 20:516-524. 2010 South & Central America; Caribbean Algae; Fish; Marine Protected Areas; Small Herbivorous Fish; Special Use Permitting; Stony Coral
Kopp, D., Y. Bouchon-Navaro, S. Cordonnier, A. Haouisee, M. Louis, and C. Bouchon. 2010. Evaluation of algal regulation by herbivorous fishes on Caribbean coral reefs. Helgoland Marine Research 64:181-190. 2010 South & Central America; Caribbean Algae; Fish; Marine Protected Areas; Small Herbivorous Fish; Special Use Permitting
Krief, S., E. J. Hendy, M. Fine, R. Yam, A. Meibom, G. L. Foster, and A. Shemesh. 2010. Physiological and isotopic responses of scleractinian corals to ocean acidification. Geochimica et Cosmochimica Acta 74:4988-5001. 2010 Calcium Carbonate Deposition; CO2; Ocean Acidity; Special Use Permitting; Stony Coral; Zooxanthellae
Landry, M. S. and C. T. Taggart. 2010. Turtle watching conservation guidelines: green turtle (Chelonia mydas) tourism in nearshore coastal environments. Biodiversity and Conservation 19:305-312. 2010 Dive, Snorkeling, & Swimming Tourism; Sea Turtles; Special Use Permitting; Tourism & Recreation; Travel Services & Tour Operators; Whales & Dolphins
Mayfield, A. B., Y. Y. Hsiao, T. Y. Fan, C. S. Chen, and R. D. Gates. 2010. Evaluating the temporal stability of stress-activated protein kinase and cytoskeleton gene expression in the Pacific reef corals Pocillopora damicornis and Seriatopora hystrix. Journal of Experimental Marine Biology and Ecology 395:215-222. 2010 US Pacific & Hawaii Field Study & Monitoring Special Use Permitting; Stony Coral
McCammon, A., P. C. Sikkel, and D. Nemeth. 2010. Effects of three Caribbean cleaner shrimps on ectoparasitic monogeneans in a semi-natural environment. Coral Reefs 29:419-426. 2010 South & Central America; Caribbean Anemones & Zooanthids; Fish; Lobster, Crab, & Shrimp; Small Herbivorous Fish; Special Use Permitting
McClanahan, T. R. 2010. Effects of Fisheries Closures and Gear Restrictions on Fishing Income in a Kenyan Coral Reef. Conservation Biology 24:1519-1528. 2010 Indian Ocean; Kenya; India Docks & Marinas; Finfish Harvest; Fish; Fishing Sector; Funding & Incentives; Marine Protected Areas; Monetary Valuation; Special Use Permitting; Valuation
Moreno-Sanchez, R. d. P. and J. H. Maldonado. 2010. Evaluating the role of co-management in improving governance of marine protected areas: an experimental approach in the Colombian Caribbean. Ecological Economics 69:2557-2567. 2010 South & Central America; Caribbean Fishing Sector; Marine Protected Areas; Special Use Permitting
Munakata, A. and M. Kobayashi. 2010. Endocrine control of sexual behavior in teleost fish. General and Comparative Endocrinology 165:456-468. 2010 Field Study & Monitoring; Lab Study Fish; Special Use Permitting
O'Donnell, M. J., A. E. Todgham, M. A. Sewell, L. M. Hammond, K. Ruggiero, N. A. Fangue, M. L. Zippay, and G. E. Hofmann. 2010. Ocean acidification alters skeletogenesis and gene expression in larval sea urchins. Marine Ecology Progress Series 398:157-171. 2010 Calcium Carbonate Deposition; CO2; Ocean Acidity; Sea Urchins; Special Use Permitting
Ojea, E. and M. L. Loureiro. 2010. Valuing the recovery of overexploited fish stocks in the context of existence and option values. Marine Policy 34:514-521. 2010 Global; Europe Existence Value & Sense of Place; Fish; Housing; Lobster, Crab, & Shrimp; Monetary Valuation; Special Use Permitting; Valuation
Pineda, J., F. Porri, V. Starczak, and J. Blythe. 2010. Causes of decoupling between larval supply and settlement and consequences for understanding recruitment and population connectivity. Journal of Experimental Marine Biology and Ecology 392:9-21. 2010 Review Invertebrates; Special Use Permitting
Portune, K. J., C. R. Voolstra, M. Medina, and A. M. Szmant. 2010. Development and heat stress-induced transcriptomic changes during embryogenesis of the scleractinian coral Acropora palmata. Marine Genomics 3:51-62. 2010 South & Central America; Caribbean Plankton; Special Use Permitting; Stony Coral
Raina, J. B., E. A. Dinsdale, B. L. Willis, and D. G. Bourne. 2010. Do the organic sulfur compounds DMSP and DMS drive coral microbial associations? Trends in Microbiology 18:101-108. 2010 Global Climate; Climate Regulation; Microorganisms; Special Use Permitting
Reitzel, A. M., L. Behrendt, and A. M. Tarrant. 2010. Light Entrained Rhythmic Gene Expression in the Sea Anemone Nematostella vectensis: The Evolution of the Animal Circadian Clock. PLoS One 5:e12805. 2010 Anemones & Zooanthids; Special Use Permitting; Surface & Groundwater Flow
Rosic, N. N., M. Pernice, S. Dunn, S. Dove, and O. Hoegh-Guldberg. 2010. Differential Regulation by Heat Stress of Novel Cytochrome P450 Genes from the Dinoflagellate Symbionts of Reef-Building Corals. Applied and Environmental Microbiology 76:2823-2829. 2010 Cuba Sea Temperatures; Special Use Permitting; Stony Coral; Toxics
Roth, M. S., M. I. Latz, R. Goericke, and D. D. Deheyn. 2010. Green fluorescent protein regulation in the coral Acropora yongei during photoacclimation. Journal of Experimental Biology 213:3644-3655. 2010 Lab Study Climate; Special Use Permitting; Stony Coral
Serrano, X., M. Grosell, and J. E. Serafy. 2010. Salinity selection and preference of the grey snapper Lutjanus griseus: field and laboratory observations. Journal of Fish Biology 76:1592-1608. 2010 Florida Field Study & Monitoring; Lab Study Complex Habitat & Resources; Fish; Mangroves; Piscivorous Fish; Salinity; Special Use Permitting
Stephen, J. A. and P. J. Harris. 2010. Commercial catch composition with discard and immediate release mortality proportions off the southeastern coast of the United States. Fisheries Research 103:18-24. 2010 Accidental & Illegal Harvest; Finfish Harvest; Fish; Fishing Sector; Invertivorous Fish; Piscivorous Fish; Special Use Permitting
STEWART-KOSTER, B., S. E. BUNN, S. J . MACKAY, N. L. POFF, R. J. NAIMAN, AND P. S. LAKE. 2010. The use of Bayesian networks to guide investments in flow and catchment restoration for impaired river ecosystems. Freshwater Biology 55:243-260. 2010 Model; Decision Support Frameworks & Tools Decision Support; Seawater Flow; Special Use Permitting; Surface & Groundwater Flow
Takemura, A., M. S. Rahman, and Y. J. Park. 2010. External and internal controls of lunar-related reproductive rhythms in fishes. Journal of Fish Biology 76:7-26. 2010 Review Fish; Special Use Permitting
TEEB. 2010. The economics of valuing ecosystem services and biodiversity. in P. Kumar, editor. The economics of ecosystems and biodiversity: ecological and economic foundations. Earthscan, United Kingdom. 2010 Climate; Climate Regulation; Cultural Policies; Monetary Valuation; Recreational Opportunities; Special Use Permitting; Tourism & Recreation; Tourism & Recreation Policies; Valuation
Thomassin, A., C. S. White, S. S. Stead, and G. David. 2010. Social acceptability of a marine protected area: The case of Reunion Island. Ocean and Coastal Management 53:169-179. 2010 Indian Ocean; Cuba; Reunion; India Environmental Education & Outreach; Marine Protected Areas; Special Use Permitting
Ushie, H., H. Kawahata, A. Suzuki, S. Murayama, and M. Inoue. 2010. Enhanced riverine carbon flux from carbonate catchment to the ocean: A comparative hydrogeochemical study on Ishigaki and Iriomote islands, southwestern Japan. Journal Of Geophysical Research-biogeosciences 115:G02017. 2010 Japan Climate; CO2; Nutrients; Ocean Acidity; Special Use Permitting; Surface & Groundwater Flow
Uthicke, S. and C. Altenrath. 2010. Water column nutrients control growth and C : N ratios of symbiont-bearing benthic foraminifera on the Great Barrier Reef, Australia. Limnology and Oceanography 55:1681-1696. 2010 Australia Non-point Source Runoff; Nutrients; Special Use Permitting
Vergauwen, L., D. Benoot, R. Blust, and D. Knapen. 2010. Long-term warm or cold acclimation elicits a specific transcriptional response and affects energy metabolism in zebrafish. Comparative Biochemistry and Physiology Part A 157:149-157. 2010 Fish; Special Use Permitting
Vignon, M. and F. Morat. 2010. Environmental and genetic determinant of otolith shape revealed by a non-indigenous tropical fish. Marine Ecology Progress Series 411:231-241. 2010 US Pacific & Hawaii Decision Support Frameworks & Tools Fish; Fishing & Harvesting Management; Fishing Sector; Piscivorous Fish; Special Use Permitting
Voinov, A. and F. Bousquet. 2010. Modelling with stakeholders. Environmental Modelling & Software 25:1268-1281. 2010 Oman Model; Decision Support Frameworks & Tools Collaboration & Partnering; Special Use Permitting
Ward-Paige, C. A., C. Mora, H. K. Lotze, C. Pattengill-Semmens, L. McClenachan, E. Arias-Castro, and R. A. Myers. 2010. Large-Scale Absence of Sharks on Reefs in the Greater-Caribbean: A Footprint of Human Pressures. PLoS One 5:e11968. 2010 South & Central America; Caribbean Apex Fish Predators; Finfish Harvest; Fishing & Harvesting Management; Special Use Permitting
Wu, W., X. H. Wang, D. Paull, and J. Kesby. 2010. Defence force activities in marine protected areas: environmental management of Shoalwater Bay Training Area, Queensland, Australia. Chinese Journal of Oceanology and Limnology 28:667-676. 2010 Global; Australia Decision Support Frameworks & Tools Corporate Responses; Marine Protected Areas; Military; Special Use Permitting
Yamana, Y., S. Sonezaki, H. I. Ogawa, and K. Kusano. 2010. Mismatch-induced lethality due to a defect in Escherichia coil RecQ helicase in exonuclease-deficient background: Dependence on MutS and UvrD functions. Plasmid 63:119-127. 2010 Special Use Permitting
Aburto-Oropeza, O., I. Dominguez-Guerrero, J. Cota-Nieto, and T. Plomozo-Lugo. 2009. Recruitment and ontogenetic habitat shifts of the yellow snapper (Lutjanus argentiventris) in the Gulf of California. Marine Biology 156:2461-2472. 2009 Fishing Sector; Mangroves; Piscivorous Fish; Special Use Permitting
Aguilar-Perera, A., C. Gonzalez-Salas, A. Tuz-Sulub, and H. Villegas-Hernandez. 2009. Fishery of the Goliath grouper, Epinephelus itajara (Teleostei: Epinephelidae) based on local ecological knowledge and fishery records in Yucatan, Mexico. Revista de Biologia Tropical 57:557-566. 2009 South & Central America; Mexico Finfish Harvest; Fish; Fishing Sector; Piscivorous Fish; Special Use Permitting
Bapary, M. A. J., P. Fainuulelei, and A. Takemura. 2009. Environmental control of gonadal development in the tropical damselfish Chrysiptera cyanea. Marine Biology Research 5:462-469. 2009 Index or Indicator Fish; Small Herbivorous Fish; Special Use Permitting
Bay, L. K., K. E. Ulstrup, H. B. Nielsen, H. Jarmer, N. Goffard, B. L. Willis, D. J. Miller, and M. J. H. Van Oppen. 2009. Microarray analysis reveals transcriptional plasticity in the reef building coral Acropora millepora. Molecular Ecology 18:3062-3075. 2009 Lab Study Special Use Permitting; Stony Coral
Blanco, E., J. Lozano, J. Rey-Maquieira. 2009. A dynamic approach to voluntary environmental contributions in tourism. Ecological Economics 69:104-114. 2009 Model Funding & Incentives; Special Use Permitting; Tourism & Recreation; Tourism & Recreation Policies
Bonkosky, M., E. A. Hernandez-Delgado, B. Sandoz, I. E. Robledo, J. Norat-Ramirez, and H. Mattei. 2009. Detection of spatial fluctuations of non-point source fecal pollution in coral reef surrounding waters in southwestern Puerto Rico using PCR-based assays. Marine Pollution Bulletin 58:45-54. 2009 Puerto Rico Fishing Sector; Health Policies; Non-point Source Runoff; Point Source Discharges; Special Use Permitting; Tourism & Recreation
Bromage, E., L. Carpenter, S. Kaattari, and M. Patterson. 2009. Quantification of coral heat shock proteins from individual coral polyps. Marine Ecology Progress Series 376:123-132. 2009 Invasive Species; Pathogens; Special Use Permitting
Bruce Duguid. 2009. Fasten Your Seat Belt: Airlines and cap-and-trade. CTC764, Carbon Trust, United Kingdom. 2009 Banks, Credit, & Securities; Climate; Special Use Permitting
Bruckner, A. W. 2009. Rate and extent of decline in Corallium (pink and red coral) populations: existing data meet the requirements for a CITES Appendix II listing. Marine Ecology Progress Series 397:319-332. 2009 US Pacific & Hawaii Review Fishing Sector; Manufacturing & Trade Policies; Ornamental Jewelry & Art; Special Use Permitting
Caras, T. and Z. Pasternak. 2009. Long-term environmental impact of coral mining at the Wakatobi marine park, Indonesia. Ocean and Coastal Management 52:539-544. 2009 Indonesia Algae; Aquaculture; Banks, Credit, & Securities; Marine Protected Areas; Octocoral; Skeletal Coral; Special Use Permitting; Stony Coral; Substrate; Tourism & Recreation
Carassou, L., C. Mellin, and D. Ponton. 2009. Assessing the diversity and abundances of larvae and juveniles of coral reef fish: A synthesis of six sampling techniques. Biodiversity and Conservation 18:355-371. 2009 Review; Decision Support Frameworks & Tools Artificial Habitat; Fish; Plankton; Seagrasses; Small Herbivorous Fish; Special Use Permitting
Cheney, K. L., C. Skogh, N. S. Hart, and N. J. Marshall. 2009. Mimicry, colour forms and spectral sensitivity of the bluestriped fangblenny, Plagiotremus rhinorhynchos. Proceedings of the Royal Society B 276:1565-1573. 2009 Field Study & Monitoring; Model Fish; Light; Special Use Permitting
Cowen, R. K. and S. Sponaugle. 2009. Larval Dispersal and Marine Population Connectivity. Annual Review of Marine Science 1:443-466. 2009 Model Special Use Permitting
Crabbe, M. J. C. 2009. Climate change and tropical marine agriculture. Journal of Experimental Botany 60:2839-2844. 2009 Global Review Agriculture; Algae; Aquaculture; Climate; CO2; Finfish Harvest; Fish; Landscape Conservation & Restoration; Lobster, Crab, & Shrimp; Mangroves; Special Use Permitting; Zooxanthellae
Csaszar, N. B. M., F. O. Seneca, and M. J. H. van Oppen. 2009. Variation in antioxidant gene expression in the scleractinian coral Acropora millepora under laboratory thermal stress. Marine Ecology Progress Series 392:93-102. 2009 US Pacific & Hawaii Lab Study Climate; Special Use Permitting; Stony Coral; Zooxanthellae
De Goeij, J. M., A. De Kluijver, F. C. Van Duyl, J. Vacelet, R. H. Wijffels, A. F. P. M. De Goeij, J. P. M. Cleutjens, and B. Schutte. 2009. Cell kinetics of the marine sponge Halisarca caerulea reveal rapid cell turnover and shedding. Journal of Experimental Biology 212:3892-3900. 2009 Encrusting Sponges; Nutrients; Special Use Permitting; Sponges
de Paiva, A. C. G., M. F. V. Lima, J. R. B. de Souza, and M. E. de Araujo. 2009. Spatial distribution of the estuarine ichthyofauna of the Rio Formoso (Pernambuco, Brazil), with emphasis on reef fish. Zoologia 26:266-278. 2009 Fish; Salinity; Sediment; Special Use Permitting
Di Franco, A., S. Bussotti, A. Navone, P. Panzalis, and P. Guidetti. 2009. Evaluating effects of total and partial restrictions to fishing on Mediterranean rocky-reef fish assemblages. Marine Ecology Progress Series 387:275-285. 2009 Finfish Harvest; Fish; Fishing & Harvesting Management; Marine Protected Areas; Piscivorous Fish; Recreational Fishing; Special Use Permitting; Tourism & Recreation
Fay, S. A., M. X. Weber, and J. H. Lipps. 2009. The distribution of Symbiodinium diversity within individual host foraminifera. Coral Reefs 10-Jan. 2009 Papua New Guinea Special Use Permitting
Fontes, J., J. E. Caselle, P. Afonso, and R. S. Santos. 2009. Multi-scale recruitment patterns and effects on local population size of a temperate reef fish. Journal of Fish Biology 75:1271-1286. 2009 US East Coast (NC, SC, GA) Fish; Plankton; Special Use Permitting
Fredou, T., B. P. Ferreira, and Y. Letourneur. 2009. Assessing the stocks of the primary snappers caught in Northeastern Brazilian Reef Systems. 2-A multi-fleet age-structured approach. Fisheries Research 99:97-105. 2009 Model Fishing Sector; Piscivorous Fish; Special Use Permitting
Geffen, Y., E. Z. Ron, and E. Rosenberg. 2009. Regulation of release of antibacterials from stressed scleractinian corals. FEMS Microbiology Letters 295:103-109. 2009 Europe Pathogens; Special Use Permitting; Stony Coral
Georgiadis, M., G. Papatheodorou, E. Tzanatos, M. Geraga, A. Ramfos, C. Koutsikopoulos, and G. Ferentinos. 2009. Coralligene formations in the eastern Mediterranean Sea: Morphology, distribution, mapping and relation to fisheries in the southern Aegean Sea (Greece) based on high-resolution acoustics. Journal of Experimental Marine Biology and Ecology 368:44-58. 2009 GIS & Maps Algae; Biological Monitoring, Mapping, & Scientific Research; Coralline Algae; Finfish Harvest; Fishing & Harvesting Management; Fishing Sector; Sediment; Special Use Permitting; Substrate; Trawling & Fishing Gear Damage
Grandcourt, E. M., T. Z. Al Abdessalaam, F. Francis, A. T. Al Shamsi, and S. A. Hartmann. 2009. Reproductive biology and implications for management of the orange-spotted grouper Epinephelus coioides in the southern Arabian Gulf. Journal of Fish Biology 74:820-841. 2009 Fishing Sector; Piscivorous Fish; Special Use Permitting
Hampton-Smith, R. J. and D. J. Peet. 2009. From Polyps to People A HIghly Familiar Response to Hypoxia. Pages 19-29 in Peers, C., G. G. Haddad, and N. S. Chandel, editors. Hypoxia And Consequences From Molecule To Malady. 2009 Decision Support Frameworks & Tools Special Use Permitting; Stony Coral
Harrison, P. A. and the RUBICODE consortium. 2009. Conservation of biodiversity and ecosystem services in Europe: from threat to action. Pensoft. 2009 Europe Review; Index or Indicator Climate; Climate Regulation; Fishing Sector; Forestry; Landscape Conservation & Restoration; Mitigation; Seawater Flow; Special Use Permitting; Surface & Groundwater Flow; Tourism & Recreation; Tourism & Recreation Policies; Valuation
Ikegami, T., E. Motohashi, H. Doi, A. Hattori, and H. Ando. 2009. Synchronized diurnal and circadian expressions of four subtypes of melatonin receptor genes in the diencephalon of a puffer fish with lunar-related spawning cycles. Neuroscience Letters 462:58-63. 2009 Fish; Special Use Permitting
Jean, Y. H., W. F. Chen, C. S. Sung, C. Y. Duh, S. Y. Huang, C. S. Lin, M. H. Tai, S. F. Tzeng, and Z. H. Wen. 2009. Capnellene, a natural marine compound derived from soft coral, attenuates chronic constriction injury-induced neuropathic pain in rats. British Journal of Pharmacology 158:713-725. 2009 Model Octocoral; Pathogens; Special Use Permitting
Keller, B. D., D. F. Gleason, E. McLeod, C. M. Woodley, S. Airame, B. D. Causey, A. M. Friedlander, R. Grober-Dunsmore, J. E. Johnson, S. L. Miller, and R. S. Steneck. 2009. Climate Change, Coral Reef Ecosystems, and Management Options for Marine Protected Areas. Environmental Management 44:1069-1088. 2009 Climate; Finfish Harvest; Fishing Sector; Invasive Species; Marine Protected Areas; Nutrients; Ocean Acidity; Pathogens; Special Use Permitting; Storms & Hurricanes; Water Depth & Sea Level
Krediet, C. J., K. B. Ritchie, and M. Teplitski. 2009. Catabolite regulation of enzymatic activities in a white pox pathogen and commensal bacteria during growth on mucus polymers from the coral Acropora palmata. Diseases of Aquatic Organisms 87:57-66. 2009 Cuba Microorganisms; Pathogens; Special Use Permitting; Stony Coral; Substrate
Krediet, C. J., K. B. Ritchie, M. Cohen, E. K. Lipp, K. P. Sutherland, and M. Teplitski. 2009. Utilization of mucus from the coral Acropora palmata by the pathogen Serratia marcescens and by environmental and coral commensal bacteria. Applied and Environmental Microbiology 75:3851-3858. 2009 Cuba Microorganisms; Pathogens; Special Use Permitting; Stony Coral
Layke, C. 2009. Measuring nature�s benefits: a preliminary roadmap for improving ecosystem service indicators. 2009 Index or Indicator; Decision Support Frameworks & Tools Climate; Climate Regulation; Corporate Responses; Existence Value & Sense of Place; Provisioning Services; Regulating Services; Social Organizations; Special Use Permitting
Maxim, L. and J. H. Spangenberg. 2009. Driving forces of chemical risks for the European biodiversity. Ecological Economics 69:43-54. 2009 Europe Decision Support Frameworks & Tools Special Use Permitting
McClanahan, T. R., J. C. Castilla, A. T. White, and O. Defeo. 2009. Healing small-scale fisheries by facilitating complex socio-ecological systems. Reviews in Fish Biology and Fisheries 19:33-47. 2009 Global Decision Support Frameworks & Tools Cultural Policies; Fishing Sector; Housing; Resource Use Management; Special Use Permitting
McLeod, E., B. Szuster, and R. Salm. 2009. Sasi and Marine Conservation in Raja Ampat, Indonesia. Coastal Management 37:656-676. 2009 Indonesia Field Study & Monitoring Cultural Policies; Housing; Resource Use Management; Social Organizations; Special Use Permitting
Morita, M., A. Iguchi, and A. Takemura. 2009. Roles of calmodulin and calcium/calmodulin-dependent protein kinase in flagellar motility regulation in the coral Acropora digitifera. Marine Biotechnology 11:118-123. 2009 Special Use Permitting; Stony Coral
Mork, E., G. L. Sjoo, N. Kautsky, and T. R. McClanahan. 2009. Top-down and bottom-up regulation of macroalgal community structure on a Kenyan reef. Estuarine Coastal and Shelf Science 84:331-336. 2009 Kenya Algae; Fertilizer & Pesticide Use; Fish; Large Herbivorous Fish; Nutrients; Sea Urchins; Small Herbivorous Fish; Special Use Permitting
Muller, E. B., S. A. L. M. Kooijman, P. J. Edmunds, F. J. Doyle, and R. M. Nisbet. 2009. Dynamic energy budgets in syntrophic symbiotic relationships between heterotrophic hosts and photoautotrophic symbionts. Journal of Theoretical Biology 259:44-57. 2009 Model Light; Nutrients; Special Use Permitting; Stony Coral
Nunes, P. A. L. D., H. Ding, and A. Markandya. 2009. The economic valuation of marine ecosystems. Fondazione Eni Enrico Mattei. 2009 Europe Review Climate; Climate Regulation; Monetary Valuation; Special Use Permitting; Valuation
Obura, D. O. 2009. Reef corals bleach to resist stress. Marine Pollution Bulletin 58:206-212. 2009 Climate; Special Use Permitting; Zooxanthellae
Palmer, C. V., C. K. Modi, and L. D. Mydlarz. 2009. Coral Fluorescent Proteins as Antioxidants. PLoS One 4:e7298. 2009 South & Central America; Caribbean Special Use Permitting; Stony Coral
Parks, N. 2009. Is regulation on ocean acidification on the horizon? Environmental Science and Technology 6118-6119. 2009 Global Field Study & Monitoring Climate; CO2; Funding & Donations; Funding & Incentives; Ocean Acidity; Special Use Permitting
Rahman, M. A. and T. Oomori. 2009. In Vitro Regulation of CaCO3 Crystal Growth by the Highly Acidic Proteins of Calcitic Sclerites in Soft Coral, Sinularia Polydactyla. Connective Tissue Research 50:285-293. 2009 Calcium Carbonate Deposition; Octocoral; Special Use Permitting
Rodriguez-Lanetty, M., S. Harii, and O. Hoegh-Guldberg. 2009. Early molecular responses of coral larvae to hyperthermal stress. Molecular Ecology 18:5101-5114. 2009 Field Study & Monitoring Climate; Pathogens; Special Use Permitting; Stony Coral
Sabourault, C., P. Ganot, E. Deleury, D. Allemand, and P. Furla. 2009. Comprehensive EST analysis of the symbiotic sea anemone, Anemonia viridis. BMC Genomics 10:333. 2009 Algae; Anemones & Zooanthids; Microorganisms; Special Use Permitting; Zooxanthellae
Santos, R. S., S. Christiansen, B. Christiansen, and S. Gubbay. 2009. Toward the conservation and management of Sedlo Seamount: A case study. Deep-Sea Research Part II: Topical Studies in Oceanography 56:2720-2730. 2009 Global; US East Coast (NC, SC, GA) Review Fishing Sector; Marine Protected Areas; Special Use Permitting
Seas At Risk. 2009. Moving Towards Low Impact Fisheries In Europe Policy Hurdles & Actions. 2009 Southeast Asia; Europe Review Accidental & Illegal Harvest; Banks, Credit, & Securities; Climate; Dredging Regulations; Dredging, Draining, & Filling; Finfish Harvest; Fish; Fishing & Harvesting Management; Fishing Sector; Funding & Incentives; Special Use Permitting; Trawling & Fishing Gear Damage; Utility Line Construction & Maintenance
Shipp, R. L. and S. A. Bortone. 2009. A prospective of the importance of artificial habitat on the management of red snapper in the Gulf of Mexico. Reviews in Fisheries Science 17:41-47. 2009 South & Central America; Mexico Accidental & Illegal Harvest; Artificial Habitat; Finfish Harvest; Fishing Sector; Lobster, Crab, & Shrimp; Piscivorous Fish; Special Use Permitting
Steinke, D., T. S. Zemlak, and P. D. N. Hebert. 2009. Barcoding Nemo: DNA-Based Identifications for the Ornamental Fish Trade. PLoS One 4:e6300. 2009 Decision Support Frameworks & Tools Aquarium & Pet Trade; Aquarium Stock; Special Use Permitting
Stelzenmuller, V., F. Maynou, and P. Martin. 2009. Patterns of species and functional diversity around a coastal marine reserve: a fisheries perspective. Aquatic Conservation: Marine and Freshwater Ecosystems 19:554-565. 2009 Spain GIS & Maps; Decision Support Frameworks & Tools Finfish Harvest; Fish; Fishing & Harvesting Management; Marine Protected Areas; Monetary Valuation; Seagrasses; Special Use Permitting
Tissot, B. N., W. J. Walsh, and M. A. Hixon. 2009. Hawaiian Islands Marine Ecosystem Case Study: Ecosystem- and Community-Based Management in Hawaii. Coastal Management 37:255-273. 2009 US Pacific & Hawaii Model Finfish Harvest; Fishing & Harvesting Management; Fishing Sector; Marine Protected Areas; Special Use Permitting
Turchin, P. 2009. Long-term population cycles in human societies. Annals of the New York Academy of Sciences 1162:1-17. 2009 Global Review Special Use Permitting
Voolstra, C. R., J. Schnetzer, L. Peshkin, C. J. Randall, A. M. Szmant, and M. Medina. 2009. Effects of temperature on gene expression in embryos of the coral Montastraea faveolata. BMC Genomics 10:627. 2009 Global Climate; Special Use Permitting; Stony Coral
Yooyongwech, S., S. Sugaya, Y. Sekozawa, and H. Gemma. 2009. Differential adaptation of high- and low-chill dormant peaches in winter through aquaporin gene expression and soluble sugar content. Plant Cell Reports 28:1709-1715. 2009 Special Use Permitting
Yost, D. M. and C. L. Mitchelmore. 2009. Dimethylsulfoniopropionate (DMSP) lyase activity in different strains of the symbiotic alga Symbiodinium microadriaticum. Marine Ecology Progress Series 386:61-70. 2009 Microorganisms; Special Use Permitting
Anu, G. and S. M. Nair. 2008. Allometric variability of heavy metals in corals of Lakshadweep islands. Toxicological and Environmental Chemistry 90:1135-1144. 2008 Calcium Carbonate Deposition; Special Use Permitting
Appeldoorn, R. S. 2008. Transforming reef fisheries management: Application of an ecosystem-based approach in the USA Caribbean. Environmental Conservation 35:232-241. 2008 South & Central America; US Virgin Islands; Puerto Rico; Caribbean Field Study & Monitoring; Decision Support Frameworks & Tools Environmental Monitoring, Mapping, & Scientific Research; Finfish Harvest; Fishing & Harvesting Management; Fishing Sector; Special Use Permitting
Beaumont, N. J., M.C. Austen, S.C. Mangi, and M. Townsend. 2008. Economic valuation for the conservation of marine biodiversity. Marine Pollution Bulletin 56:386-396. 2008 Cultural Policies; Cultural Services; Fishing Sector; Monetary Valuation; Special Use Permitting; Supporting Services; Tourism & Recreation; Tourism & Recreation Policies; Valuation
Cannon, J. 2008. A bargain for clean water. 2008 Review Agriculture; Discharge Limitations; Discharges; Non-point Source Controls; Non-point Source Runoff; Physical & Chemical Water Quality Criteria; Point & Mobile Source Controls; Point Source Discharges; Special Use Permitting; Surface & Groundwater Flow; Waterborne Discharges
Carney, R. S. 2008. Developing a better bio-geology overview and information needs for effective assessment of the environmental risks of deepwater oil and gas development. Pages 1200-1207 in Offshore Technology Conference, Proceedings. 2008 Review Special Use Permitting
D'Angelo, C., A. Denzel, A. Vogt, M. V. Matz, F. Oswald, A. Salih, G. U. Nienhaus, and J. Wiedenmann. 2008. Blue light regulation of host pigment in reef-building corals. Marine Ecology Progress Series 364:97-106. 2008 Climate; Ports & Harbors; Special Use Permitting; Stony Coral
de Paula Silva, P. H., S. McBride, R. de Nys, and N. A. Paul. 2008. Integrating filamentous 'green tide' algae into tropical pond-based aquaculture. Aquaculture 284:74-80. 2008 Australia Algae; Aquaculture; Nutrients; Remediation; Salinity; Special Use Permitting
Dewan, A. K., K. P. Maruska, and T. C. Tricas. 2008. Arginine vasotocin neuronal phenotypes among congeneric territorial and shoaling reef butterflyfishes: Species, sex and reproductive season comparisons. Journal of Neuroendocrinology 20:1382-1394. 2008 Europe Model Corallivorous Fish; Fish; Special Use Permitting
Dimond, J. and E. Carrington. 2008. Symbiosis regulation in a facultatively symbiotic temperate coral: Zooxanthellae division and expulsion. Coral Reefs 27:601-604. 2008 England Index or Indicator Primary Production; Special Use Permitting; Stony Coral; Zooxanthellae
Frisch, A. J., R. Baker, J.-P.A. Hobbs, and L. Nankervis. 2008. A quantitative comparison of recreational spearfishing and linefishing on the Great Barrier Reef: Implications for management of multi-sector coral reef fisheries. Coral Reefs 27:85-95. 2008 Australia Accidental & Illegal Harvest; Cultural Policies; Cultural Protections; Finfish Harvest; Fish; Fishing Sector; Recreational Fishing; Special Use Permitting; Tourism & Recreation
Gavella, N. 2008. On the acquisition of ownership by appropriation of sea fish and other sea organisms [O stjecanju vlasništva prisvajanjem morskih riba i drugih morskih organizama]. Zbornik Pravnog Fakulteta u Zagrebu 58:113-134. 2008 Decision Support Frameworks & Tools Designate Protected Species; Finfish Harvest; Fish; Lobster, Crab, & Shrimp; Special Use Permitting; Surface & Groundwater Flow; Tourism & Recreation
Hasler, H. and J. A. Ott. 2008. Diving down the reefs? Intensive diving tourism threatens the reefs of the northern Red Sea. Marine Pollution Bulletin 56:1788-1794. 2008 Cuba; Egypt Dive, Snorkeling, & Swimming Tourism; Environmental Education & Outreach; Fish; Recreational Opportunities; Sediment; Small Herbivorous Fish; Special Use Permitting; Tourism & Recreation
Hoover, C. A., M. Slattery, N. M. Targett, and A. G. Marsh. 2008. Transcriptome and metabolite responses to predation in a South Pacific soft coral. Biological Bulletin 214:319-328. 2008 US Pacific & Hawaii; Australia Lab Study; Model Octocoral; Special Use Permitting
Huang, H.-J., L.-H. Wang, W.-N.U. Chen, L.-S. Fang, and C.-S. Chen. 2008. Developmentally regulated localization of endosymbiotic dinoflagellates in different tissue layers of coral larvae. Coral Reefs 27:365-372. 2008 Special Use Permitting; Stony Coral
Huebert, K. B. 2008. Barokinesis and depth regulation by pelagic coral reef fish larvae. Marine Ecology Progress Series 367:261-269. 2008 Florida Fish; Invertivorous Fish; Small Herbivorous Fish; Special Use Permitting
Jankun, J., T. Doerks, A. M. Aleem, W. Lysiak-Szydlowska, and E. Skrzypczak-Jankun. 2008. Do Human lipoxygenases have a PDZ regulatory domain? Current Molecular Medicine 8:768-773. 2008 Review Pathogens; Special Use Permitting
Johnson, D. W. 2008. Combined effects of condition and density on post-settlement survival and growth of a marine fish. Oecologia 155:43-52. 2008 Field Study & Monitoring; Lab Study Fish; Small Herbivorous Fish; Special Use Permitting
Kaiser, M. J. and R. A. Kasprzak. 2008. The impact of the 2005 hurricane season on the Louisiana Artificial Reef Program. Marine Policy 32:956-967. 2008 South & Central America; Mexico Review Artificial Habitat; Fish; Infrastructural Policies; Infrastructure; Oil & Gas Industry; Special Use Permitting; Storms & Hurricanes
Kamenos, N. A., S. C. Strong, D. M. Shenoy, S. T. Wilson, A. D. Hatton, and P. G. Moore. 2008. Red coralline algae as a source of marine biogenic dimethylsulphoniopropionate. Marine Ecology Progress Series 372:61-66. 2008 Global; Cuba Algae; Climate; Climate Regulation; Coralline Algae; Plankton; Special Use Permitting
Kaniewska, P., K. R. N. Anthony, and O. Hoegh-Guldberg. 2008. Variation in colony geometry modulates internal light levels in branching corals, Acropora humilis and Stylophora pistillata. Marine Biology 155:649-660. 2008 Australia Light; Primary Production; Special Use Permitting; Stony Coral
Kellner, J. B., R. M. Nisbet, and S. D. Gaines. 2008. Spillover from marine reserves related to mechanisms of population regulation. Theoretical Ecology 1:117-127. 2008 Model Finfish Harvest; Fish; Fishing Sector; Marine Protected Areas; Special Use Permitting
Morton, J. K., M. E. Platell, and W. Gladstone. 2008. Differences in feeding ecology among three co-occurring species of wrasse (Teleostei: Labridae) on rocky reefs of temperate Australia. Marine Biology 154:577-592. 2008 Australia; Cuba Bivalves; Complex Habitat & Resources; Invertebrates; Lobster, Crab, & Shrimp; Marine Worms; Planktivorous Fish; Skeletal Coral; Special Use Permitting
Moya, A., S. Tambutte, A. Bertucci, E. Tambutte, S. Lotto, D. Vullo, C. T. Supuran, D. Allemand, and D. Zoccola. 2008. Carbonic anhydrase in the scleractinian coral Stylophora pistillata: Characterization, localization, and role in biomineralization. Journal of Biological Chemistry 283:25475-25484. 2008 Primary Production; Special Use Permitting; Stony Coral
Munn, C. B., H. K. Marchant, and A. J. Moody. 2008. Defences against oxidative stress in vibrios associated with corals. FEMS Microbiology Letters 281:58-63. 2008 Europe Microorganisms; Special Use Permitting
Naber. H., G.-H. Lange, and M. E. Hatziolos. 2008. Valuation of Marine Ecosystem Services: A Gap Analysis. The World Bank, Washington, D.C. 2008 Europe Review Climate; Climate Regulation; Monetary Valuation; Special Use Permitting; Valuation
Palmer, C. V., L. D. Mydlarz, and B. L. Willis. 2008. Evidence of an inflammatory-like response in non-normally pigmented tissues of two scleractinian corals. Proceedings of the Royal Society B 275:2687-2693. 2008 Climate; Pathogens; Special Use Permitting; Stony Coral; Substrate
Pomeroy, R. S., M. D. Pido, J. F. A. Pontillas, B. S. Francisco, A. T. White, E. M. C. Ponce De Leon, and G. T. Silvestre. 2008. Evaluation of policy options for the live reef food fish trade in the province of Palawan, Western Philippines. Marine Policy 32:55-65. 2008 US Pacific & Hawaii; Philippines Finfish Harvest; Fishing Sector; Special Use Permitting; Wholesale & Retail Trade
Przeslawski, R., S. Ahyong, M. Byrne, G. Worheide, and P. Hutchings. 2008. Beyond corals and fish: The effects of climate change on noncoral benthic invertebrates of tropical reefs. Global Change Biology 14:2773-2795. 2008 South & Central America; Australia; Caribbean Review Climate; Invasive Species; Non-point Source Runoff; Nutrients; Ocean Acidity; Salinity; Sediment; Special Use Permitting
Reimao, J. Q., A. E. Migotto, M. H. Kossuga, R. G. S. Berlinck, and A. G. Tempone. 2008. Antiprotozoan activity of Brazilian marine cnidarian extracts and of a modified steroid from the octocoral Carijoa riisei. Parasitology Research 103:1445-1450. 2008 Octocoral; Special Use Permitting
Richier, S., M. Rodriguez-Lanetty, C. E. Schnitzler, and V. M. Weis. 2008. Response of the symbiotic cnidarian Anthopleura elegantissima transcriptome to temperature and UV increase. Comparative Biochemistry and Physiology - Part D: Genomics and Proteomics 3:283-289. 2008 Anemones & Zooanthids; Light; Special Use Permitting; Stony Coral; Surface & Groundwater Flow
Rodolfo-Metalpa, R., S. Reynaud, D. Allemand, and C. Ferrier-Pages. 2008. Temporal and depth responses of two temperate corals, Cladocora caespitosa and Oculina patagonica, from the North Mediterranean Sea. Marine Ecology Progress Series 369:103-114. 2008 Algae; Light; Special Use Permitting; Stony Coral; Zooxanthellae
Santos, P. R., N. Added, J. H. Aburaya, and M. A. Rizzutto. 2008. Measurements of Sr/Ca in bones to evaluate differences in temperature. Nuclear Instruments and Methods in Physics Research, Section B: Beam Interactions with Materials and Atoms 266:1616-1618. 2008 Pharmaceuticals & Cosmetics; Pharmaceuticals & Cosmetics Sources; Special Use Permitting
Schwarz, J. A., P. B. Brokstein, C. Voolstra, A. Y. Terry, D. J. Miller, A. M. Szmant, M. A. Coffroth, and M. Medina. 2008. Coral life history and symbiosis: functional genomic resources for two reef building Caribbean corals, Acropora palmata and Montastraea faveolata. BMC Genomics 9:97. 2008 South & Central America; Caribbean Special Use Permitting; Stony Coral
Shivlani, M., V. R. Leeworthy, T. J. Murray, D. O. Suman, and F. Tonioli. 2008. Knowledge, attitudes and perceptions of management strategies and regulations of the Florida Keys National Marine Sanctuaries by commercial fishers, dive operators, and environmental group members: a baseline characterization and 10-year comparison. U.S. Department of Commerce, National Oceanic and Atmospheric Administration, Office of National Marine Sanctuaries, Silver Spring, MD. 2008 Florida Review; Field Study & Monitoring Commercial Fisheries; Environmental Monitoring, Mapping, & Scientific Research; Finfish Harvest; Landuse Management; Special Use Permitting
Smith-Keune, C. and S. Dove. 2008. Gene expression of a green fluorescent protein homolog as a host-specific biomarker of heat stress within a reef-building coral. Marine Biotechnology 10:166-180. 2008 Index or Indicator Climate; Special Use Permitting; Stony Coral
Teh, L. C. L., L. S. L. Teh, and F. C. Chung. 2008. A private management approach to coral reef conservation in Sabah, Malaysia. Biodiversity and Conservation 17:3061-3077. 2008 Malaysia Field Study & Monitoring Accidental & Illegal Harvest; Banks, Credit, & Securities; Collaboration & Partnering; Finfish Harvest; Hotel & Food Services; Marine Protected Areas; Special Use Permitting
Vidal, L. and L. Capurro Filograsso. 2008. Quantitative analysis of natural resource regulations leading to coastal ecosystems sustainability: Mexico as a case study. Journal of Coastal Research 24:876-889. 2008 Global; South & Central America; Mexico Index or Indicator; GIS & Maps Special Use Permitting
Wade, N. M., R. Melville-Smith, B. M. Degnan, and M. R. Hall. 2008. Control of shell colour changes in the lobster, Panulirus cygnus. Journal of Experimental Biology 211:1512-1519. 2008 Australia Model Aquaculture; Lobster, Crab, & Shrimp; Special Use Permitting; Substrate
WBCSD, WRI, and Meridian Institute. 2008. The corporate ecosystem services review: guidelines for identifying business risks and opportunities arising from ecosystem change. World Resources Institute, Washington DC. 2008 Global Review Biochemical & Genetic Resources; Climate; Corporate Responses; Special Use Permitting; Wetlands
Weninger, Q. 2008. Economic benefits of management reform in the Gulf of Mexico grouper fishery: A semi-parametric analysis. Environmental and Resource Economics 41:479-497. 2008 South & Central America; Mexico Model Finfish Harvest; Fish; Fishing Sector; Piscivorous Fish; Special Use Permitting
Wong, M. Y. L., P. L. Munday, P. M. Buston, and G. P. Jones. 2008. Fasting or feasting in a fish social hierarchy. Current Biology 18. 2008 Fish; Special Use Permitting
Anderson, T. W., M. H. Carr, and M. A. Hixon. 2007. Patterns and mechanisms of variable settlement and recruitment of a coral reef damselfish, Chromis cyanea. Marine Ecology Progress Series 350:109-116. 2007 South & Central America; Caribbean Small Herbivorous Fish; Special Use Permitting
Beckman, R. C. 2007. PSSAs and transit passage - Australia's pilotage system in the Torres Strait challenges the IMO and UNCLOS. Ocean Development and International Law 38:325-357. 2007 Australia Special Use Permitting
Campbell, S. J., M. S. Pratchett, A. W. Anggoro, R. L. Ardiwijaya, N. Fadli, Y. Herdiana, T. Kartawijaya, D. Mahyiddin, A. Mukminin, S. T. Pardede, E. Rudi, A. M. Siregar, and A. H. Baird. 2007. Disturbance to coral reefs in Aceh, Northern Sumatra: Impacts of the Sumatra-Andaman tsunami and pre-tsunami degradation. Atoll Research Bulletin 55-78. 2007 Indonesia Algae; Corallivorous Fish; Finfish Harvest; Fish; Large Herbivorous Fish; Marine Protected Areas; Resource Use Management; Skeletal Coral; Small Herbivorous Fish; Special Use Permitting; Turf Algae
Carpenter, L. W. and M. R. Patterson. 2007. Water flow influences the distribution of photosynthetic efficiency within colonies of the scleractinian coral Montastrea annularis (Ellis and Solander, 1786); implications for coral bleaching. Journal of Experimental Marine Biology and Ecology 351:26-Oct. 2007 Primary Production; Seawater Flow; Special Use Permitting; Stony Coral; Surface & Groundwater Flow
Cinner, J. E. 2007. Designing marine reserves to reflect local socioeconomic conditions: Lessons from long-enduring customary management systems. Coral Reefs 26:1035-1045. 2007 Papua New Guinea Finfish Harvest; Fish; Marine Protected Areas; Special Use Permitting
Collier, C., Dodge, R., Gilliiam, Gracie, K., Gregg, L., Jaap, W., Mastry, M., and Poulos, N. 2007. Rapid Response and Restoration for coral reef injuries in the southeest Florida. Southeast Florida Coral Reef Initiative. 2007 Florida Field Study & Monitoring Mitigation; Security Policies; Special Use Permitting
Dodds, L. A., J. M. Roberts, A. C. Taylor, and F. Marubini. 2007. Metabolic tolerance of the cold-water coral Lophelia pertusa (Scleractinia) to temperature and dissolved oxygen change. Journal of Experimental Marine Biology and Ecology 349:205-214. 2007 Field Study & Monitoring Calcium Carbonate Deposition; Climate; Finfish Harvest; Special Use Permitting; Stony Coral
Frisch, A. J., S. P. W. Walker, M. I. McCormick, and T. K. Solomon-Lane. 2007. Regulation of protogynous sex change by competition between corticosteroids and androgens: An experimental test using sandperch, Parapercis cylindrica. Hormones and Behavior 52:540-545. 2007 Fish; Special Use Permitting; Substrate
Glaser, K. B. 2007. HDAC inhibitors: clinical update and mechanism-based potential. Biochemical Pharmacology 75:659-671. 2007 Pathogens; Special Use Permitting
Hawkins, J. P., C. M. Roberts, F. R. Gell, and C. Dytham. 2007. Effects of trap fishing on reef fish communities. Aquatic Conservation: Marine and Freshwater Ecosystems 17:111-132. 2007 South & Central America; Puerto Rico; Jamaica; Caribbean Field Study & Monitoring Corallivorous Fish; Finfish Harvest; Fish; Fishing Sector; Invertivorous Fish; Special Use Permitting
Hoegh-Guldberg, O., G. Muller-Parker, C. B. Cook, R. D. Gates, E. Gladfelter, R. K. Trench, and V. M. Weis. 2007. Len Muscatine (1932-2007) and his contributions to the understanding of algal-invertebrate endosymbiosis. Coral Reefs 26:731-739. 2007 Field Study & Monitoring Special Use Permitting
Johnson, D. W. 2007. Habitat complexity modifies post-settlement mortality and recruitment dynamics of a marine fish. Ecology 88:1716-1725. 2007 Complex Habitat & Resources; Fish; Special Use Permitting; Substrate
Juanes, F. 2007. Role of habitat in mediating mortality during the post-settlement transition phase of temperate marine fishes. Journal of Fish Biology 70:661-677. 2007 US East Coast (NC, SC, GA) Fish; Fishing Sector; Marine Protected Areas; Special Use Permitting
Kao, H.-T., S. Sturgis, R. DeSalle, J. Tsai, D. Davis, D. F. Gruber, and V. A. Pieribone. 2007. Dynamic regulation of fluorescent proteins from a single species of coral. Marine Biotechnology 9:733-746. 2007 South & Central America; Belize Special Use Permitting; Stony Coral
Kassahn, K. S., R. H. Crozier, A. C. Ward, G. Stone, and M. J. Caley. 2007. From transcriptome to biological function: Environmental stress in an ectothermic vertebrate, the coral reef fish Pomacentrus moluccensis. BMC Genomics 8. 2007 Fish; Special Use Permitting
Mayfield, A. B. and R. D. Gates. 2007. Osmoregulation in anthozoan-dinoflagellate symbiosis. Comparative Biochemistry and Physiology Part A 147:10-Jan. 2007 Global Review Algae; Special Use Permitting; Zooxanthellae
O�Garra, Tanya. 2007. Estimating the Total Economic Value (TEV) of the Navakavu LMMA in Vitu Levu Island (Fiji). Component 2A- Project 2A2, Coral Reef Initiatives for the Pacific (CRISP), New Caledonia. 2007 US Pacific & Hawaii; Australia; Fiji Finfish Harvest; Fish; Fishing Sector; Housing; Monetary Valuation; Shoreline Protection; Special Use Permitting; Valuation
Pais, A., L. A. Chessa, S. Serra, A. Ruiu, G. Meloni, and Y. Donno. 2007. The impact of commercial and recreational harvesting for Paracentrotus lividus on shallow rocky reef sea urchin communities in North-western Sardinia, Italy. Estuarine Coastal and Shelf Science 73:589-597. 2007 Europe Finfish Harvest; Fishing Sector; Marine Protected Areas; Sea Urchins; Special Use Permitting; Tourism & Recreation
Park, Y.-J., J.-G. Park, N. Hiyakawa, Y.-D. Lee, S.-J. Kim, and A. Takemura. 2007. Diurnal and circadian regulation of a melatonin receptor, MT1, in the golden rabbitfish, Siganus guttatus. General and Comparative Endocrinology 150:253-262. 2007 Fish; Special Use Permitting
Penin, L., M. Adjeroud, M. S. Pratchett, and T. P. Hughes. 2007. Spatial distribution of juvenile and adult corals around Moorea (French Polynesia): Implications for population regulation. Bulletin of Marine Science 80:379-389. 2007 Special Use Permitting; Stony Coral
Price, A. R. G., M. J. Keeling, and I. N. Stewart. 2007. A robustness metric integrating spatial and temporal information: Application to coral reefs exposed to local and regional disturbances. Marine Ecology Progress Series 331:101-108. 2007 Global; Indian Ocean; India; Thailand Index or Indicator Climate; Dredging Regulations; Dredging, Draining, & Filling; Sea Temperatures; Special Use Permitting; Storms & Hurricanes; Water Depth & Sea Level
Puverel, S., F. Houlbreque, E. Tambutte, D. Zoccola, P. Payan, N. Caminiti, S. Tambutte, and D. Allemand. 2007. Evidence of low molecular weight components in the organic matrix of the reef building coral, Stylophora pistillata. Comparative Biochemistry and Physiology Part A 147:850-856. 2007 Echinoderms; Molluscs; Special Use Permitting; Stony Coral
Sammarco, P. W., P. Hallock, J. C. Lang, and R. S. Legore. 2007. Roundtable discussion groups summary papers: Environmental bio-indicators in coral reef ecosystems: The need to align research, monitoring, and environmental regulation. Environmental Bioindicators 2:35-46. 2007 Review; Field Study & Monitoring; Index or Indicator Environmental Monitoring, Mapping, & Scientific Research; Funding & Donations; Funding & Incentives; Remediation; Resource Use Management; Special Use Permitting; Toxics
Schmitt, R. J. and S. J. Holbrook. 2007. The scale and cause of spatial heterogeneity in strength of temporal density dependence. Ecology 88:1241-1249. 2007 Field Study & Monitoring; Model Fish; Small Herbivorous Fish; Special Use Permitting
Tarrant, A. M. 2007. Hormonal signaling in cnidarians: Do we understand the pathways well enough to know whether they are being disrupted? Ecotoxicology 16:13-May. 2007 Decision Support Frameworks & Tools Special Use Permitting
Tsounis, G., S. Rossi, J.-M. Gili, and W. E. Arntz. 2007. Red coral fishery at the costa brava (NW Mediterranean): Case study of an overharvested precious coral. Ecosystems 10:975-986. 2007 Cuba; Spain Review; Model Calcium Carbonate Deposition; Finfish Harvest; Fishing Sector; Octocoral; Ornamental Jewelry & Art; Souvenir & Decorative Trade; Special Use Permitting
United Nations (UN). 2007. An update on marine genetic resources: scientific research, commercial uses and a database on marine bioprospecting. United Nations informal Consultative Process on Oceans and the Law of the Sea, New York. 2007 Biochemical & Genetic Resources; Biological Monitoring, Mapping, & Scientific Research; Marine Protected Areas; Pharmaceuticals & Cosmetics; Pharmaceuticals & Cosmetics Sources; Scientific Research; Special Use Permitting
Van Dongen-Vogels, V. and J. Mallefet. 2007. Fluorescent labelling of cultivated corals as a sustainable management tool in coral trade and reefs conservation. Mer 45:81-90. 2007 Cuba Decision Support Frameworks & Tools Manufacturing & Trade Policies; Special Use Permitting; Stony Coral
White, J. W. and R. R. Warner. 2007. Safety in numbers and the spatial scaling of density-dependent mortality in a coral reef fish. Ecology 88:3044-3054. 2007 Fish; Planktivorous Fish; Plankton; Special Use Permitting
Wong, M. Y. L., P. M. Buston, P. L. Munday, and G. P. Jones. 2007. The threat of punishment enforces peaceful cooperation and stabilizes queues in a coral-reef fish. Proceedings of the Royal Society B 274:1093-1099. 2007 Special Use Permitting
Ahmed, A. F., Y.-T. Hsieh, Z.-H. Wen, Y.-C. Wu, and J.-H. Sheu. 2006. Polyoxygenated sterols from the formosan soft coral Sinularia gibberosa. Journal of Natural Products 69:1275-1279. 2006 Octocoral; Special Use Permitting
Chen, P. 2006. Evaluation on service value of wetland ecosystem in Xiamen City. Wetland Science 4:101-107. 2006 Global; China GIS & Maps Environmental Monitoring, Mapping, & Scientific Research; Landscape Conservation & Restoration; Mangroves; Monetary Valuation; Scientific Research; Shoreline Protection; Special Use Permitting; Surface & Groundwater Flow; Tourism & Recreation; Wetlands
Coppe, A., G. A. Danieli, and S. Bortoluzzi. 2006. REEF: Searching regionally enriched features in genomes. BMC Bioinformatics 7. 2006 Decision Support Frameworks & Tools Special Use Permitting
Davidson, E. H. and D. H. Erwin. 2006. Gene regulatory networks and the evolution of animal body plans. Science 311:796-800. 2006 Pharmaceuticals & Cosmetics Sources; Special Use Permitting
Dearden, P., M. Bennett, and R. Rollins. 2006. Implications for coral reef conservation of diver specialization. Environmental Conservation 33:353-363. 2006 Cuba; Thailand Field Study & Monitoring; Model Dive, Snorkeling, & Swimming Tourism; Environmental Monitoring, Mapping, & Scientific Research; Funding & Incentives; Landuse Management; Marine Protected Areas; Special Use Permitting; Tourism & Recreation
Dirhamsyah, D. 2006. Indonesian legislative framework for coastal resources management: A critical review and recommendation. Ocean and Coastal Management 49:68-92. 2006 Indonesia Review Fishing Sector; Special Use Permitting
Dobson, J. 2006. Sharks, wildlife tourism, and state regulation. Pages 15-23 in Tourism in Marine Environments. 2006 South & Central America; Florida; Caribbean; South Africa Apex Fish Predators; Special Use Permitting; Tourism & Recreation; Whales & Dolphins
Dove, S., J. C. Ortiz, S. Enriquez, M. Fine, P. Fisher, R. Iglesias-Prieto, D. Thornhill, and O. Hoegh-Guldberg. 2006. Response of holosymbiont pigments from the scleractinian coral Montipora monasteriata to short-term heat stress. Limnology and Oceanography 51:1149-1158. 2006 Special Use Permitting; Stony Coral
Field, S. F., M. Y. Bulina, I. V. Kelmanson, J. P. Bielawski, and M. V. Matz. 2006. Adaptive evolution of multicolored fluorescent proteins in reef-building corals. Journal of Molecular Evolution 62:332-339. 2006 Field Study & Monitoring Algae; Primary Production; Special Use Permitting; Stony Coral; Zooxanthellae
Forrester, G. E., B. Evans, M. A. Steele, and R. R. Vance. 2006. Assessing the magnitude of intra- and interspecific competition in two coral reef fishes. Oecologia 148:632-640. 2006 Field Study & Monitoring Special Use Permitting
Groeneveld, O. L. 2006. The mine manager's toolkit. Pages 5-Mar in Australasian Institute of Mining and Metallurgy Publication Series. 2006 Australia Decision Support Frameworks & Tools Climate; Manufacturing & Trade; Mining Policies; Ocean Acidity; Special Use Permitting
Halpern, B.S., K. Cottenie, B.R. Broitman. 2006. Strong Top-Down Control in Southern California Kelp Forest Ecosystems. Science 312:1230-1232. 2006 Global Finfish Harvest; Non-point Source Runoff; Nutrients; Primary Production; Special Use Permitting
Johnson, D. W. 2006. Density dependence in marine fish populations revealed at small and large spatial scales. Ecology 87:319-325. 2006 Fish; Special Use Permitting
Kahn, A. E. and M. J. Durako. 2006. Thalassia testudinum seedling responses to changes in salinity and nitrogen levels. Journal of Experimental Marine Biology and Ecology 335:12-Jan. 2006 Florida Nutrients; Primary Production; Salinity; Seagrasses; Special Use Permitting
Kalker, T. 2006. On interoperability of DRM. Pages 45-46 in Proceedings of the ACM Workshop On Digital Rights Management, DRM'06. Co-located with the 13th ACM Conference on Computer and Communications Security, CCS'06. 2006 Europe Model Metals, Electronics, & Machinery Products; Special Use Permitting
Lombo, F., A. Velasco, A. Castro, F. De La Calle, A. F. Brana, J. M. Sanchez-Puelles, C. Mendez, and J. A. Salas. 2006. Deciphering the biosynthesis pathway of the antitumor thiocoraline from a marine actinomycete and its expression in two Streptomyces species. ChemBioChem 7:366-376. 2006 Indian Ocean; Mozambique; India Molluscs; Octocoral; Special Use Permitting
Minerals Management Service. 2006. Leasing Oil and Natural Gas Resources. U.S. Department of the Interior. 2006 South & Central America; India; Mexico Monetary Valuation; Natural Gas & Electric Power; Special Use Permitting; Utility Policies
Morita, M., A. Nishikawa, A. Nakajima, A. Iguchi, K. Sakai, A. Takemura, and M. Okuno. 2006. Eggs regulate sperm flagellar motility initiation, chemotaxis and inhibition in the coral Acropora digitifera, A. gemmifera and A. tenuis. Journal of Experimental Biology 209:4574-4579. 2006 Special Use Permitting; Stony Coral
Munday, P. L., A. M. Cardoni, and C. Syms. 2006. Cooperative growth regulation in coral-dwelling fishes. Biology Letters 2:355-358. 2006 Fish; Special Use Permitting
Overholtzer-McLeod, K. L. 2006. Consequences of patch reef spacing for density-dependent mortality of coral-reef fishes. Ecology 87:1017-1026. 2006 Global; Bahamas Field Study & Monitoring Complex Habitat & Resources; Fish; Piscivorous Fish; Planktivorous Fish; Small Herbivorous Fish; Special Use Permitting
Park, Y.-J., J.-G. Park, S.-J. Kim, Y.-D. Lee, MD .S . Rahman, and A. Takemura. 2006. Melatonin receptor of a reef fish with lunar-related rhythmicity: Cloning and daily variations. Journal of Pineal Research 41:166-174. 2006 Fish; Special Use Permitting
Pears, R. J., J. H. Choat, B. D. Mapstone, and G. A. Begg. 2006. Demography of a large grouper, Epinephelus fuscoguttatus, from Australia's Great Barrier Reef: Implications for fishery management. Marine Ecology Progress Series 307:259-272. 2006 US Pacific & Hawaii; Australia Fishing & Harvesting Management; Fishing Sector; Live Collection; Piscivorous Fish; Resource Use Management; Special Use Permitting
Rahman, M. A., Y. Isa, and T. Uehara. 2006. Studies on two closely related species of octocorallians: Biochemical and molecular characteristics of the organic matrices of endoskeletal sclerites. Marine Biotechnology 8:415-424. 2006 Octocoral; Special Use Permitting
Ritchie, K. B. 2006. Regulation of microbial populations by coral surface mucus and mucus-associated bacteria. Marine Ecology Progress Series 322:14-Jan. 2006 South & Central America; Caribbean Invasive Species; Pathogens; Special Use Permitting; Stony Coral
Rodriguez-Lanetty, M., W. S. Phillips, and V. M. Weis. 2006. Transcriptome analysis of a cnidarian - Dinoflagellate mutualism reveals complex modulation of host gene expression. BMC Genomics 7. 2006 Anemones & Zooanthids; Special Use Permitting
Schneider, K. and J. Erez. 2006. The effect of carbonate chemistry on calcification and photosynthesis in the hermatypic coral Acropora eurystoma. Limnology and Oceanography 51:1284-1293. 2006 Lab Study CO2; Primary Production; Special Use Permitting; Stony Coral
Temraz, T. A., W. E. Houssen, M. Jaspars, D. R. Woolley, K. N. Wease, S. N. Davies, and R. H. Scott. 2006. A pyridinium derivative from Red Sea soft corals inhibited voltage-activated potassium conductances and increased excitability of rat cultured sensory neurones. BMC Pharmacology 6. 2006 Octocoral; Pharmaceuticals & Cosmetics Sources; Special Use Permitting
Titlyanov, E. A., T. V. Titlyanova, I. M. Yakovleva, and T. L. Kalita. 2006. Rhythmical changes in the division and degradation of symbiotic algae in hermatypic corals. Russian Journal of Marine Biology 32:19-Dec. 2006 Japan Algae; Special Use Permitting; Stony Coral; Zooxanthellae
Tsounis, G., S. Rossi, M. Aranguren, J.-M. Gili, and W. Arntz. 2006. Effects of spatial variability and colony size on the reproductive output and gonadal development cycle of the Mediterranean red coral (Corallium rubrum L.). Marine Biology 148:513-527. 2006 Decision Support Frameworks & Tools Finfish Harvest; Fishing & Harvesting Management; Octocoral; Special Use Permitting
Van Alstyne, K. L., P. Schupp, and M. Slattery. 2006. The distribution of dimethylsulfoniopropionate in tropical Pacific coral reef invertebrates. Coral Reefs 25:321-327. 2006 Global; US Pacific & Hawaii Algae; Climate; Climate Regulation; Pharmaceuticals & Cosmetics Sources; Special Use Permitting; Sponges; Zooxanthellae
Vize, P. D. 2006. Deepwater broadcast spawning by Montastraea cavernosa, Montastraea franksi, and Diploria strigosa at the Flower Garden Banks, Gulf of Mexico. Coral Reefs 25:169-171. 2006 South & Central America; Mexico Special Use Permitting; Stony Coral
Yum, S. 2006. Ubiquitin expression in soft coral (Scleronephthya gracillimum) exposed to environmental stresses. Korean Journal of Genetics 28:149-156. 2006 Field Study & Monitoring Environmental Monitoring, Mapping, & Scientific Research; Octocoral; Special Use Permitting; Stony Coral
Boulon, R., M. Chiappone, R. Halley, W. Jaap, B. Keller, B. Kruczynski, M. Miller, and C. Rogers. 2005. Atlantic Acropora Status Review. 2005 Global; South & Central America; Florida; US East Coast (NC, SC, GA); Jamaica; Belize; Caribbean; Mexico Review Anchoring & Vessel Grounding; Climate; Coastal Development; Dive, Snorkeling, & Swimming Tourism; Non-point Source Runoff; Nutrients; Pathogens; Physical Damage; Sediment; Special Use Permitting; Stony Coral; Storms & Hurricanes; Zooxanthellae
Bruckner, A. W. 2005. The importance of the marine ornamental reef fish trade in the wider Caribbean. Revista de Biologia Tropical 53:127-137. 2005 Global; South & Central America; Florida; Puerto Rico; US Pacific & Hawaii; US East Coast (NC, SC, GA); Atlantic Ocean; Maldives; Sri Lanka; India; Japan; Vietnam; Indonesia; Philippines; Caribbean; Europe Anemones & Zooanthids; Aquarium & Pet Trade; Aquarium Stock; Corallivorous Fish; Fishing Sector; Invertivorous Fish; Piscivorous Fish; Planktivorous Fish; Small Herbivorous Fish; Special Use Permitting
Capili, E. B., A. C. S. Ibay, and J. R. T. Villarin. 2005. Climate change impacts and adaptation on Philippine coasts. in Proceedings of MTS/IEEE OCEANS, 2005. 2005 Review Banks, Credit, & Securities; Climate; Collaboration & Partnering; Fishing Sector; Pathogens; Plankton; Seagrasses; Special Use Permitting
Cervino, J. M., R. Hayes, T. J. Goreau, and G. W. Smith. 2005. Erratum: Zooxanthellae regulation in yellow blotch/band and other coral diseases contrasted with temperature related bleaching: In situ destruction vs expulsion (Symbiosis (2004) 37 (63-85)). Symbiosis 38:101-104. 2005 Pathogens; Special Use Permitting; Zooxanthellae
Enriquez, S. and N. I. Pantoja-Reyes. 2005. Form-function analysis of the effect of canopy morphology on leaf self-shading in the seagrass Thalassia testudinum. Oecologia 145:235-243. 2005 Model; Index or Indicator Light; Seagrasses; Special Use Permitting
Hill, R. and P. J. Ralph. 2005. Diel and seasonal changes in fluorescence rise kinetics of three scleractinian corals. Functional Plant Biology 32:549-559. 2005 Special Use Permitting; Stony Coral; Zooxanthellae
Huang, Y.-C., J.-H. Guh, Y.-C. Shen, and C.-M. Teng. 2005. Investigation of anticancer mechanism of clavulone II, a coral cyclopentenone prostaglandin analog, in human acute promyelocytic leukemia. Journal of Biomedical Science 12:335-345. 2005 Special Use Permitting
Kroon, F. J., P. L. Munday, D. A. Westcott, J.-P.A. Hobbs, and N. R. Liley. 2005. Aromatase pathway mediates sex change in each direction. Proceedings of the Royal Society B 272:1399-1405. 2005 Fish; Special Use Permitting
Kuffner, I. B. 2005. Temporal variation in photosynthetic pigments and UV-absorbing compounds in shallow populations of two Hawaiian reef corals. Pacific Science 59:561-580. 2005 US Pacific & Hawaii Light; Special Use Permitting; Stony Coral
Lang, M. A. 2005. The USA scientific diving medical and safety experience. South Pacific Underwater Medicine Society Journal 35:154-161. 2005 Global; Cuba Review; Decision Support Frameworks & Tools Dive, Snorkeling, & Swimming Tourism; Environmental Monitoring, Mapping, & Scientific Research; Scientific Research; Special Use Permitting; Tourism & Recreation
National Marine Sanctuaries. 2005. MPAs and Enforcement. Module 7, NOAA. 2005 Special Use Permitting
Rahman, M. A., Y. Isa, and T. Uehara. 2005. Proteins of calcified endoskeleton: II Partial amino acid sequences of endoskeletal proteins and the characterization of proteinaceous organic matrix of spicules from the alcyonarian, Synularia polydactyla. Proteomics 5:885-893. 2005 Calcium Carbonate Deposition; Octocoral; Special Use Permitting
Raubenheimer, D., W. L. Zemke-White, R. J. Phillips, and K. D. Clements. 2005. Algal macronutrients and food selection by the omnivorous marine fish Girella tricuspidata. Ecology 86:2601-2610. 2005 Field Study & Monitoring; Lab Study Algae; Fish; Nutrients; Small Herbivorous Fish; Special Use Permitting
Rayment, G. E. 2005. Northeast Australian experience in minimizing environmental harm from waste recycling and potential pollutants of soil and water. Communications in Soil Science and Plant Analysis 36:121-131. 2005 Australia Chemical Use Regulations; Fertilizer & Pesticide Use; Special Use Permitting; Surface & Groundwater Flow
Rowley, A. F., C. L. Vogan, G. W. Taylor, and A. S. Clare. 2005. Prostaglandins in non-insectan invertebrates: Recent insights and unsolved problems. Journal of Experimental Biology 208:14-Mar. 2005 Review Special Use Permitting; Tunicates
Sandin, S. A. and S. W. Pacala. 2005. Demographic theory of coral reef fish populations with stochastic recruitment: Comparing sources of population regulation. American Naturalist 165:107-119. 2005 Model Fish; Special Use Permitting
Sandin, S. A. and S. W. Pacala. 2005. Fish aggregation results in inversely density-dependent predation on continuous coral reefs. Ecology 86:1520-1530. 2005 Antilles Complex Habitat & Resources; Fish; Special Use Permitting
Shick, J. M., C. Ferrier-Pages, R. Grover, and D. Allemand. 2005. Effects of starvation, ammonium concentration, and photosynthesis on the UV-dependent accumulation of mycosporine-like amino acids (MAAs) in the coral Stylophora pistillata. Marine Ecology Progress Series 295:135-156. 2005 Light; Primary Production; Special Use Permitting; Stony Coral; Sunscreen Use; Zooxanthellae
Symons, L. C. and J. Morris. 2005. Development of multi-hazard contingency plans and tools for the National Marine Sanctuary System. Pages 9628-9631 in 2005 International Oil Spill Conference, IOSC 2005. 2005 Florida; US Pacific & Hawaii; Samoa; American Samoa Decision Support Frameworks & Tools Anchoring & Vessel Grounding; Cultural Protections; Marine Protected Areas; Petroleum Spills; Special Use Permitting; Storms & Hurricanes; Whales & Dolphins
Symons, L. C., M. Hodges, and M. S. Devany. 2005. Flexibility for NOAA in development and application of multi-hazard contingency plans and response tools: The Sanctuaries Hazardous Incident Logistics Database System (SHIELDS). Pages 11158-11160 in 2005 International Oil Spill Conference, IOSC 2005. 2005 US Pacific & Hawaii Review; GIS & Maps; Decision Support Frameworks & Tools Anchoring & Vessel Grounding; Boating Regulations; Cultural Policies; Cultural Protections; Environmental Monitoring, Mapping, & Scientific Research; Marine Protected Areas; Petroleum Spills; Small Boats; Special Use Permitting; Storms & Hurricanes
Trudel, B. K., R. C. Belore, B. J. Jessiman, and S. L. Ross. 2005. A microcomputer-based spill impact assessment system for untreated and chemically dispersed oil spills in the U.S. Gulf of Mexico. Page 4770 in 2005 International Oil Spill Conference, IOSC 2005. 2005 South & Central America; Florida; US East Coast (NC, SC, GA); Mexico Model Coastal Defense; Petroleum Spills; Resource Use Management; Special Use Permitting
U.S. Environmental Protection Agency (EPA). 2005. Reviewing environmental impact statements for fishery management plans. Office of Federal Activities, Washington DC. 2005 Review; Decision Support Frameworks & Tools Accidental & Illegal Harvest; Fishing Sector; Internet & Telecommunications; Special Use Permitting
U.S. Environmental Protection Agency (EPA). 2005. Reviewing environmental impact statements for fishery management plans. Washington DC. 2005 Review Accidental & Illegal Harvest; Fish; Fishing Sector; Special Use Permitting
Vermeij, M. J. A. 2005. Substrate composition and adult distribution determine recruitment patterns in a Caribbean brooding coral. Marine Ecology Progress Series 295:123-133. 2005 South & Central America; Florida; Caribbean Algae; Coralline Algae; Special Use Permitting; Stony Coral; Substrate
Vize, P. D., J. A. Embesi, M. Nickell, D. P. Brown, and D. K. Hagman. 2005. Tight temporal consistency of coral mass spawning at the Flower Garden Banks, Gulf of Mexico, from 1997-2003. Gulf of Mexico Science 23:107-114. 2005 South & Central America; Mexico Special Use Permitting; Stony Coral
Ando, R., H. Mizuno, and A. Miyawaki. 2004. Regulated fast nucleocytoplasmic shuttling observed by reversible protein highlighting. Science 306:1370-1373. 2004 Special Use Permitting
Cervino, J. M., R. Hayes, T. J. Goreau, and G. W. Smith. 2004. Zooxanthellae regulation in yellow blotch/band and other coral diseases contrasted with temperature related bleaching: In situ destruction vs expulsion. Symbiosis 37:63-85. 2004 South & Central America; US Pacific & Hawaii; Caribbean Algae; Microorganisms; Pathogens; Special Use Permitting; Stony Coral; Zooxanthellae
Coleman, F. C., P. B. Baker, and C. C. Koenig. 2004. A Review of Gulf of Mexico Marine Protected Areas: Successes, Failures, and Lessons Learned. Fisheries 29:21-Oct. 2004 South & Central America; Mexico Review; Field Study & Monitoring Commercial Fisheries; Finfish Harvest; Fish; Fishing Sector; Lobster, Crab, & Shrimp; Marine Protected Areas; Recreational Fishing; Special Use Permitting; Tourism & Recreation; Trawling & Fishing Gear Damage
Coma, R., E. Pola, M. Ribes, and M. Zabala. 2004. Long-term assessment of temperate octocoral mortality patterns, protected vs. unprotected areas. Ecological Applications 14:1466-1478. 2004 Dive, Snorkeling, & Swimming Tourism; Marine Protected Areas; Octocoral; Special Use Permitting; Tourism & Recreation
Craig, M. T., F. J. Fodrie, and P. A. Hastings. 2004. The nearshore fish assemblage of the Scripps Coastal Reserve, San Diego, California. Coastal Management 32:341-351. 2004 Decision Support Frameworks & Tools Fish; Special Use Permitting
Crawford, B. R., A. Siahainenia, C. Rotinsulu, and A. Sukmara. 2004. Compliance and enforcement of community-based coastal resource management regulations in North Sulawesi, Indonesia. Coastal Management 32:39-50. 2004 US Pacific & Hawaii; Oman; Indonesia Review Fishing & Harvesting Management; Fishing Sector; Resource Use Management; Special Use Permitting; Stony Coral
Denny, C. M., T. J. Willis, and R. C. Babcock. 2004. Rapid recolonisation of snapper Pagrus auratus: Sparidae within an offshore island marine reserve after implementation of no-take status. Marine Ecology Progress Series 272:183-190. 2004 Finfish Harvest; Fish; Fishing & Harvesting Management; Piscivorous Fish; Special Use Permitting
Duval, M. A., D. N. Rader, K. C. Lindeman. 2004. Linking habitat protection and marine protected area programs to conserve coral reefs and associated back reef habitats. Bulletin of Marine Science 75:321-334. 2004 Field Study & Monitoring Coastal Development; Complex Habitat & Resources; Environmental Monitoring, Mapping, & Scientific Research; Fish; Fishing Sector; Marine Protected Areas; Special Use Permitting
Forrester, G. E. and M. A. Steele. 2004. Predators, prey refuges, and the spatial scaling of density-dependent prey mortality. Ecology 85:1332-1342. 2004 Special Use Permitting
Goreau, T. J., J. M. Cervino, and R. Pollina. 2004. Increased zooxanthellae numbers and mitotic index in electrically stimulated corals. Symbiosis 37:107-120. 2004 Global; Indonesia Index or Indicator; Decision Support Frameworks & Tools Algae; CO2; Nutrients; Primary Production; Sediment; Special Use Permitting; Stony Coral; Zooxanthellae
Grigg, R. W. 2004. Harvesting impacts and invasion by an Alien species decrease estimates of black coral yield off Maui, Hawai'i. Pacific Science 58:6-Jan. 2004 Fishing Sector; Ornamental Jewelry & Art; Special Use Permitting
Hackett, J. D., D. M. Anderson, D. L. Erdner, and D. Bhattacharya. 2004. Dinoflagellates: A remarkable evolutionary experiment. American Journal of Botany 91:1523-1534. 2004 Review Algae; Special Use Permitting
Hohenegger, J. 2004. Depth coenoclines and environmental considerations of Western Pacific larger foraminifera. Journal of Foraminiferal Research 34:Sep-33. 2004 US Pacific & Hawaii Algae; Climate; Nutrients; Primary Production; Sediment; Special Use Permitting; Substrate; Water Depth & Sea Level
Inoue, M., A. Suzuki, M. Nohara, H. Kan, A. Edward, and H. Kawahata. 2004. Coral skeletal tin and copper concentrations at Pohnpei, Micronesia: Possible index for marine pollution by toxic anti-biofouling paints. Environmental Pollution 129:399-407. 2004 US Pacific & Hawaii; Australia; Japan; Micronesia Index or Indicator Calcium Carbonate Deposition; Special Use Permitting; Stony Coral; Waterborne Discharges
Jameson, S. C., R. A. Kelty. 2004. A review of indicators of land-based pollution stress on coral reefs. Honolulu, HI. 2004 Review; Field Study & Monitoring; Index or Indicator Biocriteria; Biological Monitoring, Mapping, & Scientific Research; Environmental Monitoring, Mapping, & Scientific Research; Fertilizer & Pesticide Use; Landscape Conservation & Restoration; Microorganisms; Nutrients; Sediment; Special Use Permitting
Jarving, R., I. Jarving, R. Kurg, A. R. Brash, and N. Samel. 2004. On the evolutionary origin of cyclooxygenase (COX) isozymes: Characterization of marine invertebrate COX genes points to independent duplication events in vertebrate and invertebrate lineages. Journal of Biological Chemistry 279:13624-13633. 2004 Special Use Permitting
Overholtzer-McLeod, K. L. 2004. Variance in reef spatial structure masks density dependence in coral-reef fish populations on natural versus artificial reefs. Marine Ecology Progress Series 276:269-280. 2004 Artificial Habitat; Fish; Planktivorous Fish; Special Use Permitting
Pomeroy, R. S., J. E. Parks, and L. M. Watson. 2004. How is your MPA doing? a guidebook of natural and social indicators for evaluating marine protected area management effectiveness. he World Conservation Union, Gland, Switzerland. 2004 Review; Field Study & Monitoring; Index or Indicator; Decision Support Frameworks & Tools Climate; Collaboration & Partnering; Fishing Sector; Funding & Donations; Funding & Incentives; Marine Protected Areas; Special Use Permitting; Tourism & Recreation; Tourism & Recreation Policies; Waste Management Policies
Shick, J. M. 2004. The continuity and intensity of ultraviolet irradiation affect the kinetics of biosynthesis, accumulation, and conversion of mycosporine-like amino acids (MAAs) in the coral Stylophora pistillata. Limnology and Oceanography 49:442-458. 2004 Lab Study Light; Special Use Permitting; Zooxanthellae
Shinn, E. A. 2004. The mixed value of environmental regulations: Do acroporid corals deserve endangered species status? Marine Pollution Bulletin 49:531-533. 2004 Special Use Permitting
Takemura, A., MD .S . Rahman, S. Nakamura, J. P. Young, and K. Takano. 2004. Lunar cycles and reproductive activity in reef fishes with particular attention to rabbitfishes. Fish and Fisheries 5:317-328. 2004 Review Fish; Special Use Permitting
Valentine, P. S., A. Birtles, M. Curnock, P. Arnold, and A. Dunstan. 2004. Getting closer to whales - Passenger expectations and experiences, and the management of swim with dwarf minke whale interactions in the Great Barrier Reef. Tourism Management 25:647-655. 2004 Australia Dive, Snorkeling, & Swimming Tourism; Special Use Permitting; Tourism & Recreation; Whales & Dolphins
Webster, M. S. 2004. Density dependence via intercohort competition in a coral-reef fish. Ecology 85:986-994. 2004 Bahamas Fish; Special Use Permitting
Zoccola, D., E. Tambutte, E. Kulhanek, S. Puverel, J.-C. Scimeca, D. Allemand, and S. Tambutte. 2004. Molecular cloning and localization of a PMCA P-type calcium ATPase from the coral Stylophora pistillata. Biochimica et Biophysica Acta - Biomembranes 1663:117-126. 2004 Model Special Use Permitting; Stony Coral
Aubanel, A., C. Monier, A. Benet, J.-A. Di Jorio, and B. Salvat. 2003. Management plan for marine environment in French Polynesia [Les plans de gestion de l'espace maritime en Polynesie Francaise]. Oceanis 29:375-395. 2003 Special Use Permitting
Bandara, N. J. G. J. 2003. Water and wastewater related issues in Sri Lanka. Water Science and Technology 47:305-312. 2003 Sri Lanka Agriculture; Irrigation; Non-point Source Runoff; Pathogens; Petroleum Spills; Special Use Permitting; Surface & Groundwater Flow; Wastewater Discharge; Water; Waterborne Discharges
Borelli, G., N. Mayer-Gostan, P. L. Merle, H. De Pontual, G. Boeuf, D. Allemand, and P. Payan. 2003. Composition of biomineral organic matrices with special emphasis on turbot (Psetta maxima) otolith and endolymph. Calcified Tissue International 72:717-725. 2003 Sea Urchins; Special Use Permitting
Jan, R.-Q., C.-T. Ho, and F.-K. Shiah. 2003. Determinants of territory size of the dusky gregory. Journal of Fish Biology 63:1589-1597. 2003 Taiwan Algae; Small Herbivorous Fish; Special Use Permitting
Kairo, M., B. Ali, O. Cheesman, K. Haysom, and S. Murphy. 2003. Invasive species threats in the caribbean region. CAB International. 2003 South & Central America; Antilles; Cuba; Caribbean Review Invasive Species; Special Use Permitting
McBride, R. S., J. R. Styer, and R. Hudson. 2003. Spawning cycles and habitats for ballyhoo (Hemiramphus brasiliensis) and balao (H. balao) in south Florida. Fishery Bulletin 101:583-589. 2003 Florida; US East Coast (NC, SC, GA); Atlantic Ocean Index or Indicator; GIS & Maps Commercial Fishing Boats; Finfish Harvest; Fish; Fishing Sector; Special Use Permitting
Nanami, A. and M. Nishihira. 2003. Population dynamics and spatial distribution of coral reef fishes: Comparison between continuous and isolated habitats. Environmental Biology of Fishes 68:101-112. 2003 Fish; Small Herbivorous Fish; Special Use Permitting
Perreault, H. A. N., K. Semsar, and J. Godwin. 2003. Fluoxetine treatment decreases territorial aggression in a coral reef fish. Physiology and Behavior 79:719-724. 2003 Field Study & Monitoring; Lab Study Fish; Planktivorous Fish; Special Use Permitting
Perry, A. N. and M. S. Grober. 2003. A model for social control of sex change: Interactions of behavior, neuropeptides, glucocorticoids, and sex steroids. Hormones and Behavior 43:31-38. 2003 Europe Model Fish; Planktivorous Fish; Special Use Permitting
Reichelt-Brushett, A. J. and G. McOrist. 2003. Trace metals in the living and nonliving components of scleractinian corals. Marine Pollution Bulletin 46:1573-1582. 2003 Field Study & Monitoring Environmental Monitoring, Mapping, & Scientific Research; Special Use Permitting; Stony Coral; Zooxanthellae
Sadovy, Y., M. Kulbicki, P. Labrosse, Y. Letourneur, P. Lokani, and T. J. Donaldson. 2003. The humphead wrasse, Cheilinus undulatus: Synopsis of a threatened and poorly known giant coral reef fish. Reviews in Fish Biology and Fisheries 13:327-364. 2003 US Pacific & Hawaii Review Cultural Policies; Cultural Protections; Finfish Harvest; Fishing Sector; Live Collection; Non-Monetary Valuation; Planktivorous Fish; Seagrasses; Special Use Permitting
Shima, J. S. and C. W. Osenberg. 2003. Cryptic density dependence: Effects of covariation between density and site quality in reef fish. Ecology 84:46-52. 2003 Fish; Special Use Permitting
United Nations Environment Program - Global Programme of Action for the Protection of the Marine Environment from Land-Based Activities (UNEP/GPA). 2003. Diagnosis of the erosion processes in the Caribbean sandy beaches. Environmental Agency, Ministry of Science, Technology and Environment, Government of Cuba, Cuba. 2003 Global; South & Central America; Cuba; Belize; Caribbean; Mexico Beaches & Nature Parks; Climate; Special Use Permitting; Tourism & Recreation
Vermeij, M. J. A., E. Sampayo, K. Broker, and R. P. M. Bak. 2003. Variation in planulae release of closely related coral species. Marine Ecology Progress Series 247:75-84. 2003 South & Central America; Caribbean Special Use Permitting; Stony Coral
Walmsley, S. F. and A. T. White. 2003. Influence of social, management and enforcement factors on the long-term ecological effects of marine sanctuaries. Environmental Conservation 30:388-407. 2003 Cuba; Philippines Decision Support Frameworks & Tools Fish; Fishing & Harvesting Management; Fishing Sector; Special Use Permitting; Stony Coral; Substrate
Webster, M. S. 2003. Temporal density dependence and population regulation in a marine fish. Ecology 84:623-628. 2003 Bahamas Field Study & Monitoring Fish; Special Use Permitting
Williams, J. C., G. V. Byrd, and N. B. Konyukhov. 2003. Whiskered Auklets Aethia pygmaea, foxes, humans and how to right a wrong. Marine Ornithology 31:175-180. 2003 Invasive Species; Marine Birds; Plankton; Special Use Permitting
Yap, H. T. and R. A. Molina. 2003. Comparison of coral growth and survival under enclosed, semi-natural conditions and in the field. Marine Pollution Bulletin 46:858-864. 2003 Field Study & Monitoring Algae; Nutrients; Special Use Permitting; Stony Coral
Armsworth, P. R. 2002. Recruitment limitation, population regulation, and larval connectivity in reef fish metapopulations. Ecology 83:1092-1104. 2002 Model Fish; Special Use Permitting
Bech, M. 2002. A survey of imposex in muricids from 1996 to 2000 and identification of optimal indicators of tributyltin contamination along the east coast of Phuket Island, Thailand. Marine Pollution Bulletin 44:887-896. 2002 Global; Thailand; Southeast Asia Index or Indicator Shipping, Storage, & Warehousing; Special Use Permitting
Bech, M. 2002. Imposex and tributyltin contamination as a consequence of the establishment of a marina, and increasing yachting activities at Phuket Island, Thailand. Environmental Pollution 117:421-429. 2002 Global; Thailand Index or Indicator Docks & Marinas; Mangroves; Small Boats; Special Use Permitting
Carr M.H., T.W. Anderson, M.A. Hixon. 2002. Biodiversity, population regulation, and the stability of coral-reef fish communities. Proceedings of the National Academy of Sciences 99:11241-11245. 2002 Field Study & Monitoring Fish; Special Use Permitting
Christie, P., A. White, and E. Deguit. 2002. Starting point or solution? Community-based marine protected areas in the Philippines. Journal of Environmental Management 66:441-454. 2002 Philippines Boating Regulations; Complex Habitat & Resources; Dive, Snorkeling, & Swimming Tourism; Finfish Harvest; Fishing Sector; Marine Protected Areas; Seastars; Small Boats; Special Use Permitting; Stony Coral; Storms & Hurricanes
Crabtree, R. E., P. B. Hood, and D. Snodgrass. 2002. Age, growth, and reproduction of permit (Trachinotus falcatus) in Florida waters. Fishery Bulletin 100:26-34. 2002 Florida Model Commercial Fisheries; Finfish Harvest; Fish; Fishing Sector; Recreational Fishing; Special Use Permitting; Tourism & Recreation
Francis, J., A. Nilsson, and D. Waruinge. 2002. Marine protected areas in the Eastern African Region: How successful are they? Ambio 31:503-511. 2002 Kenya; Tanzania; Mozambique; Comoros; Madagascar; Seychelles; Mauritius Review; Index or Indicator Banks, Credit, & Securities; Coastal Development; Corporate Responses; Infrastructural Policies; Infrastructure; Marine Protected Areas; Special Use Permitting
Holbrook, S. J. and R. J. Schmitt. 2002. Competition for shelter space causes density-dependent predation mortality in damselfishes. Ecology 83:2855-2868. 2002 Field Study & Monitoring Anemones & Zooanthids; Fish; Invertivorous Fish; Planktivorous Fish; Plankton; Small Herbivorous Fish; Special Use Permitting; Stony Coral
Leidel, D. J. 2002. Explosive operations and its regulation in the Gulf of Mexico. Pages 343-361 in Proceedings of the Annual Conference on Explosives and Blasting Technique. 2002 South & Central America; Mexico Mitigation; Special Use Permitting
Lok, A., C. Metin, A. Ulas, F. O. Duzbastilar, and A. Tokac. 2002. Artificial reefs in Turkey. ICES Journal of Marine Science 59. 2002 Field Study & Monitoring Artificial Habitat; Dive, Snorkeling, & Swimming Tourism; Finfish Harvest; Fishing Sector; Recreational Fishing; Special Use Permitting; Tourism & Recreation; Trawling & Fishing Gear Damage
Luppi, T. A., E. D. Spivak, K. Anger, and J. L. Valero. 2002. Patterns and processes of Chasmagnathus granulata and Cyrtograpsus angulatus (Brachyura: Grapsidae) recruitment in Mar Chiquita coastal lagoon, Argentina. Estuarine Coastal and Shelf Science 55:287-297. 2002 US East Coast (NC, SC, GA) Field Study & Monitoring; Lab Study; Model Invertebrates; Lobster, Crab, & Shrimp; Plankton; Special Use Permitting; Substrate
Miller, M. W. and C. L. Gerstner. 2002. Reefs of an uninhabited Caribbean island: Fishes, benthic habitat, and opportunities to discern reef fishery impact. Biological Conservation 106:37-44. 2002 South & Central America; Haiti; Jamaica; Caribbean Field Study & Monitoring; Index or Indicator Complex Habitat & Resources; Finfish Harvest; Fishing Sector; Piscivorous Fish; Sea Urchins; Special Use Permitting
Mitchelmore, C. L., J. A. Schwarz, and V. M. Weis. 2002. Development of symbiosis-specific genes as biomarkers for the early detection of cnidarian-algal symbiosis breakdown. Marine Environmental Research 54:345-349. 2002 Global Lab Study; Model Algae; Anemones & Zooanthids; Pathogens; Special Use Permitting
Nitschke, P., M. Mather, and F. Juanes. 2002. Evidence for density-dependent mortality in recruitment of a temperate reef fish, cunner Tautogolabrus adspersus, among similar reefs in the vicinity of an anthropogenic disturbance. Marine Ecology Progress Series 226:165-178. 2002 Algae; Complex Habitat & Resources; Special Use Permitting
Owen, R., A. Knap, M. Toaspern, and K. Carbery. 2002. Inhibition of coral photosynthesis by the antifouling herbicide Irgarol 1051. Marine Pollution Bulletin 44:623-632. 2002 Florida; US Virgin Islands; Cuba; Bermuda Algae; Docks & Marinas; Fertilizer & Pesticide Use; Light; Primary Production; Special Use Permitting; Zooxanthellae
Ralph, P. J., R. Gademann, A. W. D. Larkum, and M. Kuhl. 2002. Spatial heterogeneity in active chlorophyll fluorescence and PSII activity of coral tissues. Marine Biology 141:639-646. 2002 Light; Primary Production; Special Use Permitting; Stony Coral; Zooxanthellae
Reed, J. K. 2002. Deep-water Oculina coral reefs of Florida: Biology, impacts, and management. Hydrobiologia 471:43-55. 2002 Florida Review Anchoring & Vessel Grounding; Coastal Defense; Commercial Fisheries; Dredging Regulations; Dredging, Draining, & Filling; Finfish Harvest; Fish; Fishing Sector; Lobster, Crab, & Shrimp; Marine Protected Areas; Piscivorous Fish; Recreational Fishing; Skeletal Coral; Special Use Permitting; Tourism & Recreation; Trawling & Fishing Gear Damage
Salvat, B. and A. Aubanel. 2002. The management of coral reefs of French Polynesia [La gestion des recifs coralliens de Polynesie francaise]. Revue d'Ecologie (La Terre et la Vie) 57:193-251. 2002 Global; US Pacific & Hawaii; Australia; France Field Study & Monitoring Algae; Aquaculture; Cultural Policies; Cultural Protections; Echinoderms; Environmental Monitoring, Mapping, & Scientific Research; Finfish Harvest; Molluscs; Nutrients; Special Use Permitting; Tourism & Recreation
Shick, J. M. and W. C. Dunlap. 2002. Mycosporine-like amino acids and related gadusols: Biosynthesis, accumulation, and UV-protective functions in aquatic organisms. Annual Review of Physiology 64:223-262. 2002 Review Algae; Light; Microorganisms; Special Use Permitting; Sunscreen Use
Shima, J. S. 2002. Mechanisms of density- and number-dependent population regulation of a coral-reef fish. Marine and Freshwater Research 53:175-179. 2002 Fish; Planktivorous Fish; Special Use Permitting
Steele, M. A. and G. E. Forrester. 2002. Early postsettlement predation on three reef fishes: Effects on spatial patterns of recruitment. Ecology 83:1076-1091. 2002 Plankton; Special Use Permitting
Tupper, M. and M. A. Rudd. 2002. Species-specific impacts of a small marine reserve on reef fish production and fishing productivity in the Turks and Caicos Islands. Environmental Conservation 29:484-492. 2002 Turks and Caicos Decision Support Frameworks & Tools Algae; Finfish Harvest; Fishing Sector; Fleshy Macroalgae; Funding & Incentives; Invertivorous Fish; Marine Protected Areas; Piscivorous Fish; Special Use Permitting
Anderson, T. W. 2001. Predator responses, prey refuges, and density-dependent mortality of a marine fish. Ecology 82:245-257. 2001 Field Study & Monitoring; Lab Study Complex Habitat & Resources; Special Use Permitting
Baine, M. 2001. Artificial reefs: A review of their design, application, management and performance. Ocean and Coastal Management 44:241-259. 2001 Global Review; Field Study & Monitoring Artificial Habitat; Environmental Monitoring, Mapping, & Scientific Research; Fishing Sector; Special Use Permitting
Buffington, S. 2001. Managing the challenges of decommissioning with technology, research and regulations. Pages 123-128 in Proceedings of the International Offshore and Polar Engineering Conference. 2001 Artificial Habitat; Pipelines; Special Use Permitting
Done, T. J. 2001. Useful science for coral reef management: The cooperative research centre model. Bulletin of Marine Science 69:309-315. 2001 Australia Model; GIS & Maps; Decision Support Frameworks & Tools Ballast Discharge; Finfish Harvest; Non-point Source Runoff; Seastars; Special Use Permitting; Wastewater Discharge
Elliott, G., B. Mitchell, B. Wiltshire, I. A. Manan, and S. Wismer. 2001. Community participation in marine protected area management Wakatobi National Park, Sulawesi, Indonesia. Coastal Management 29:295-316. 2001 Indonesia Finfish Harvest; Landuse Management; Marine Protected Areas; Special Use Permitting; Tourism & Recreation
Gorbunov, M. Y., Z. S. Kolber, M. P. Lesser, and P. G. Falkowaski. 2001. Photosynthesis and photoprotection in symbiotic corals. Limnology and Oceanography 46:75-85. 2001 Cuba Light; Primary Production; Special Use Permitting
Gorfine, H. K. and C. D. Dixon. 2001. Diver behaviour and its influence on assessments of a quota-managed abalone fishery. Journal of Shellfish Research 20:787-794. 2001 Australia Finfish Harvest; Fishing Sector; Funding & Incentives; Special Use Permitting
Grigg, R. W. 2001. Black coral: History of sustainable fishery in Hawai'i. Pacific Science 55:291-299. 2001 US Pacific & Hawaii Fishing Sector; Ornamental Jewelry & Art; Special Use Permitting; Wholesale & Retail Trade
Harborne, A. R., D. C. Afzal, and M. J. Andrews. 2001. Honduras: Caribbean Coast. Marine Pollution Bulletin 42:1221-1235. 2001 South & Central America; Belize; Honduras; Caribbean; Mexico Field Study & Monitoring Agriculture; Chemical Use Regulations; Coastal Development; Environmental Monitoring, Mapping, & Scientific Research; Fertilizer & Pesticide Use; Finfish Harvest; Funding & Donations; Funding & Incentives; Infrastructure; Mangroves; Marine Protected Areas; Non-point Source Runoff; Seagrasses; Sediment; Sewage Treatment; Special Use Permitting; Storms & Hurricanes; Tourism & Recreation; Waste Management Policies; Wetlands
Lesser, M. P. and M. Y. Gorbunov. 2001. Diurnal and bathymetric changes in chlorophyll fluorescence yields of reef corals measured in situ with a fast repetition rate fluorometer. Marine Ecology Progress Series 212:69-77. 2001 Bahamas Field Study & Monitoring Primary Production; Special Use Permitting; Stony Coral; Zooxanthellae
Losada-Tosteson, V., J. M. Posada, and F. Losada. 2001. Size and reproductive status of fished spotted spiny lobster, Panulirus guttatus, in Morrocoy National Park, Venezuela: A preliminary report. Marine and Freshwater Research 52:1599-1603. 2001 South & Central America; Venezuela; Caribbean Field Study & Monitoring Dive, Snorkeling, & Swimming Tourism; Finfish Harvest; Fishing Sector; Lobster, Crab, & Shrimp; Special Use Permitting
Mahon, R. and W. Hunte. 2001. Trap mesh selectivity and the management of reef fishes. Fish and Fisheries 2:356-375. 2001 South & Central America; Caribbean Model Banks, Credit, & Securities; Finfish Harvest; Fish; Fishing Sector; Special Use Permitting
Nlyibigira, E. I. and Z. S. Abdallah. 2001. Distribution and abundance, in maize and sorghum, of lepidopteran stemborers and associated indigenous parasitoids in zanzibar. Insect Science and its Application 21:335-346. 2001 Fiji Invasive Species; Special Use Permitting
Obura, D. O. 2001. Kenya. Marine Pollution Bulletin 42:1264-1278. 2001 Indian Ocean; Somalia; Kenya; India Field Study & Monitoring; Decision Support Frameworks & Tools Coastal Development; Environmental Monitoring, Mapping, & Scientific Research; Fish; Fishing Sector; Infrastructure; Mangroves; Marine Protected Areas; Non-point Source Runoff; Nutrients; Salinity; Seagrasses; Sediment; Shoreline Protection; Special Use Permitting; Substrate; Surface & Groundwater Flow; Tourism & Recreation
Parras, D. A. 2001. Coastal resource management in the Philippines: A case study in the Central Visayas region. Journal of Environment and Development 10:80-103. 2001 Oman; Philippines Field Study & Monitoring Fishing Sector; Resource Use Management; Special Use Permitting
Roberts, R. 2001. A review of settlement cues for larval abalone (Haliotis spp.). Journal of Shellfish Research 20:571-586. 2001 Review Algae; Coralline Algae; Microorganisms; Special Use Permitting; Surface & Groundwater Flow
Rogers, C. S. and J. Beets. 2001. Degradation of marine ecosystems and decline of fishery resources in marine protected areas in the US Virgin Islands. Environmental Conservation 28:312-322. 2001 South & Central America; US Virgin Islands; Caribbean Review Anchoring & Vessel Grounding; Boating Regulations; Finfish Harvest; Fish; Fishing Sector; Marine Protected Areas; Pathogens; Piscivorous Fish; Seagrasses; Small Herbivorous Fish; Special Use Permitting; Storms & Hurricanes
Rouphael, A. B. and G. J. Inglis. 2001. \Take only photographs and leave only footprints\"?: An experimental study of the impacts of underwater photographers on coral reef dive sites". Biological Conservation 100:281-287. 2001 Australia; Cuba Model Dive, Snorkeling, & Swimming Tourism; Marine Protected Areas; Special Use Permitting; Stony Coral; Tourism & Recreation
Shima, J. S. 2001. Regulation of local populations of a coral reef fish via joint effects of density- and number-dependent mortality. Oecologia 126:58-65. 2001 Fish; Planktivorous Fish; Special Use Permitting
Vannier, J., WA NG Shang Qi, and M. Coen. 2001. Leperditicopid arthropods (Ordovician-Late Devonian): Functional morphology and ecological range. Journal of Paleontology 75:75-95. 2001 China Review Arthropods; Bivalves; Salinity; Special Use Permitting
Botero, L. and R. Alvarez-Leon. 2000. The Caribbean coast of Colombia. Seas at the millennium - an environmental evaluation - Volume 1 663-675. 2000 South & Central America; Caribbean Cultural Policies; Road Construction & Maintenance; Special Use Permitting; Tourism & Recreation; Waste Management Policies
Boutilier, R. G., T. G. West, D. M. Webber, G. H. Pogson, K. A. Mesa, J. Wells, and M. J. Wells. 2000. The protective effects of hypoxia-induced hypometabolism in the Nautilus. Journal of comparative physiology B 170:261-268. 2000 Papua New Guinea Lab Study Octopus & Squid; Special Use Permitting
Chan, T.T.C. and Y. Sadovy. 2000. Profile of the marine aquarium fish trade in Hong Kong. Aquarium Sciences and Conservation 2:197-213. 2000 Global Review Aquarium & Pet Trade; Aquarium Stock; Designate Protected Species; Invertivorous Fish; Live Collection; Small Herbivorous Fish; Special Use Permitting; Wholesale & Retail Trade
Cooke, A., O. Ratomahenina, E. Ranaivoson, and H. Razafindrainibe. 2000. Madagascar. Seas at the millennium - an environmental evaluation - Volume 2 113-131. 2000 Mozambique; Madagascar Field Study & Monitoring; Decision Support Frameworks & Tools Aquaculture; Environmental Monitoring, Mapping, & Scientific Research; Finfish Harvest; Fishing Sector; Lobster, Crab, & Shrimp; Mangroves; Nutrients; Sediment; Special Use Permitting
Craig, P., S. Saucerman, and S. Wiegman. 2000. The central South Pacific Ocean (American Samoa). Seas at the millennium - an environmental evaluation - Volume 2 765-772. 2000 US Pacific & Hawaii; Australia; Pacific Ocean; Samoa; American Samoa Accidental & Illegal Harvest; Environmental Education & Outreach; Finfish Harvest; Fish; Landuse Management; Marine Protected Areas; Sediment; Special Use Permitting
Debrot, A. O. and I. Nagelkerken. 2000. User perceptions on coastal resource state and management options in Curacao. Revista de Biologia Tropical 48:95-106. 2000 South & Central America; Antilles; Caribbean Review; Index or Indicator Banks, Credit, & Securities; Dive, Snorkeling, & Swimming Tourism; Finfish Harvest; Fish; Fishing Sector; Lobster, Crab, & Shrimp; Resource Use Management; Sea Turtles; Snails & Conch; Special Use Permitting; Tourism & Recreation
Dempsey, M. J., W. E. Mathieson, and T. A. Winters. 2000. Learning from Offshore Decommissioning Practices in Europe and the USA. Pages 741-746 in SPE - Asia Pacific Oil and Gas Conference. 2000 US Pacific & Hawaii; Australia; Europe Internet & Telecommunications; Special Use Permitting
Esslemont, G. 2000. Heavy metals in seawater, marine sediments and corals from the Townsville section, Great Barrier Reef Marine Park, Queensland. Marine Chemistry 71:215-231. 2000 Australia Dredging, Draining, & Filling; Marine Protected Areas; Sediment; Special Use Permitting; Stony Coral
Forrester, G. E. and M. A. Steele. 2000. Variation in the presence and cause of density-dependent mortality in three species of reef fishes. Ecology 81:2416-2427. 2000 Field Study & Monitoring Fish; Special Use Permitting
Gell, F. and M. Watson. 2000. UK overseas territories in the northeast Caribbean: Anguilla, British Virgin Islands, Montserrat. Seas at the millennium - an environmental evaluation - Volume 1 615-626. 2000 South & Central America; US Virgin Islands; US East Coast (NC, SC, GA); Antilles; British Virgin Islands; Caribbean; United Kingdom Banks, Credit, & Securities; Beaches & Nature Parks; Finfish Harvest; Fish; Mangroves; Seagrasses; Special Use Permitting; Storms & Hurricanes; Tourism & Recreation
Guard, M., A. J. Mmochi, and C. Horrill. 2000. Tanzania. Seas at the millennium - an environmental evaluation - Volume 2 83-98. 2000 Tanzania Algae; Beaches & Nature Parks; Finfish Harvest; Mangroves; Seagrasses; Special Use Permitting; Sponges; Tourism & Recreation
Jebreen, E. J., R. T. Counihan, D. R. Fielder, and B. M. Degnan. 2000. Synchronous oogenesis during the semilunar spawning cycle of the tropical abalone Haliotis asinina. Journal of Shellfish Research 19:845-851. 2000 Australia Special Use Permitting
Jeffrey, C. F. G. 2000. Annual, coastal and seasonal variation in Grenadian demersal fisheries (1986-1993) and implications for management. Bulletin of Marine Science 66:305-319. 2000 US Virgin Islands; Bermuda Finfish Harvest; Fishing Sector; Piscivorous Fish; Special Use Permitting; Tourism & Recreation
Karalis, T., L. Gupta, M. Chu, B. A. Campbell, M. F. Capra, and P. A. Maywood. 2000. Three clusters of ciguatera poisoning: Clinical manifestations and public health implications. Medical Journal of Australia 172:160-162. 2000 Fish; Health Policies; Special Use Permitting
Labrosse, P., R. Fichez, R. Farman, and T. Adams. 2000. New Caledonia. Seas at the millennium - an environmental evaluation - Volume 2 723-736. 2000 US Pacific & Hawaii; Australia; New Caledonia; Europe; France Agriculture; Aquaculture; Aquarium & Pet Trade; Aquarium Stock; Banks, Credit, & Securities; Commercial Fishing Boats; Finfish Harvest; Fishing Sector; Lobster, Crab, & Shrimp; Mangroves; Sea Turtles; Special Use Permitting; Valuation
Levin, P. S., N. Tolimieri, M. Nicklin, and P. F. Sale. 2000. Integrating individual behavior and population ecology: The potential for habitat-dependent population regulation in a reef fish. Behavioral Ecology 11:565-571. 2000 South & Central America; Caribbean Model Complex Habitat & Resources; Fish; Small Herbivorous Fish; Special Use Permitting
Maloney, K. A., L. A. Maguire, and E. A. Lind. 2000. NEUSE RIVER ESTUARY MODELING AND MONITORING PROJECT STAGE 1: ASSESSMENT OF STAKEHOLDER INTEREST AND CONCERNS TO INFORM LONG-TERM MODELING. 50237, Fuqua School of Business, Duke University, Durham, (NC, USA). 2000 Field Study & Monitoring; Model Environmental Monitoring, Mapping, & Scientific Research; Nutrients; Special Use Permitting; Surface & Groundwater Flow; Tourism & Recreation
Maragos, J. E. 2000. Hawaiian Islands (U.S.A.). Seas at the millennium - an environmental evaluation - Volume 2 791-812. 2000 US Pacific & Hawaii Field Study & Monitoring Agriculture; Anchoring & Vessel Grounding; Apex Fish Predators; Aquaculture; Aquarium & Pet Trade; Aquarium Stock; Beaches & Nature Parks; Boating Activities; Boating Regulations; Dredging Regulations; Dredging, Draining, & Filling; Environmental Education & Outreach; Environmental Monitoring, Mapping, & Scientific Research; Finfish Harvest; Fish; Fishing Sector; Golf Course Operations; Hotel & Food Services; Invasive Species; Marine Birds; Marine Debris; Marine Protected Areas; Military; Pathogens; Recreational Fishing; Scientific Research; Sea Turtles; Sediment; Special Use Permitting; Storms & Hurricanes; Tourism & Recreation; Trawling & Fishing Gear Damage; Waterborne Discharges; Wetlands
Penchaszadeh, P. E., C. A. Leon, H. Alvarez, D. Bone, P. Castellano, M. M. Castillo, Y. Diaz, M. P. Garcia, M. Lemus, F. Losada, A. Martin, P. Miloslavich, C. Paredes, D. Perez, M. Sebastiani, D. Stecconi, V. Roa, and A. Villamizar. 2000. Venezuela. Seas at the millennium - an environmental evaluation - Volume 1 643-661. 2000 South & Central America; US East Coast (NC, SC, GA); Atlantic Ocean; Venezuela; Caribbean Beaches & Nature Parks; Bivalves; Discharge Limitations; Discharges; Fishing Sector; Mangroves; Molluscs; Nutrients; Primary Production; Salinity; Seagrasses; Special Use Permitting; Surface & Groundwater Flow
Rao, D. V. S. 2000. The Bay of Bengal. Seas at the millennium - an environmental evaluation - Volume 2 269-284. 2000 Aquaculture; Fishing Sector; Mangroves; Mitigation; Special Use Permitting; Surface & Groundwater Flow
Reynolds, W. S., J. A. Schwarz, and V. M. Weis. 2000. Symbiosis-enhanced gene expression in cnidarian-algal associations: Cloning and characterization of a cDNA, sym32, encoding a possible cell adhesion protein. Comparative Biochemistry and Physiology Part A 126:33-44. 2000 Model Anemones & Zooanthids; Microorganisms; Special Use Permitting; Zooxanthellae
Scheffer, M., W. Brock, and F. Westley. 2000. Socioeconomic mechanisms preventing optimum use of ecosystem services: an interdisciplinary theoretical analysis. Ecosystems 3:451-471. 2000 Model Environmental Monitoring, Mapping, & Scientific Research; Special Use Permitting
Sheppard, C. R. C. 2000. The Red Sea. Seas at the millennium - an environmental evaluation - Volume 2 35-45. 2000 Indian Ocean; India Algae; Finfish Harvest; Fishing Sector; Fleshy Macroalgae; Mangroves; Nutrients; Primary Production; Seagrasses; Sediment; Sewage Treatment; Special Use Permitting; Substrate; Surface & Groundwater Flow; Trawling & Fishing Gear Damage; Waste Management Policies
Thorburn, C. C. 2000. Changing customary marine resource management practice and institutions: The case of Sasi Lola in the Kei Islands, Indonesia. World Development 28:1461-1479. 2000 Indonesia Field Study & Monitoring Complex Habitat & Resources; Designate Protected Species; Finfish Harvest; Housing; Landscape Conservation & Restoration; Resource Use Management; Special Use Permitting
Titlyanov, E. A., J. Tsukahara, T. V. Titlyanova, V. A. Leletkin, R. Van Woesik, and K. Yamazato. 2000. Zooxanthellae population density and physiological state of the coral Stylophora pistillata during starvation and osmotic shock. Symbiosis 28:303-322. 2000 Primary Production; Special Use Permitting; Zooxanthellae
Van Tussenbroek, B. I., C. A. Galindo, and J. Marquez. 2000. Dormancy and foliar density regulation in Thalassia testudinum. Aquatic Botany 68:281-295. 2000 South & Central America; Caribbean Nutrients; Seagrasses; Special Use Permitting
Webster, M. S. and M. A. Hixon. 2000. Mechanisms and individual consequences of intraspecific competition in a coral-reef fish. Marine Ecology Progress Series 196:187-194. 2000 South & Central America; Bahamas; Caribbean Fish; Plankton; Special Use Permitting
Caselle, J. E. 1999. Early post-settlement mortality in a coral reef fish and its effect on local population size. Ecological Monographs 69:177-194. 1999 US Virgin Islands Fish; Special Use Permitting
Fagoonee, I., H. B. Wilson, M. P. Hassell, and J. R. Turner. 1999. The dynamics of zooxanthellae populations: A long-term study in the field. Science 283:843-845. 1999 Global Field Study & Monitoring Algae; Special Use Permitting; Zooxanthellae
Gawel, M. J. 1999. Protection of marine benthic habitats in the Pacific islands. A case study of Guam. Oceanologica Acta 22:721-726. 1999 US Pacific & Hawaii; Guam Lab Study Anchoring & Vessel Grounding; Discharge Limitations; Discharges; Finfish Harvest; Non-point Source Runoff; Seastars; Sediment; Small Boats; Special Use Permitting; Surface & Groundwater Flow; Tourism & Recreation
Hammer, O. S. 1999. Computer-aided study of growth patterns in tabulate corals, exemplified by Catenipora heintzi from Ringerike, Oslo region. Norsk Geologisk Tidsskrift 79:219-226. 1999 Sediment; Special Use Permitting
Hoegh-Guldberg, O. and R. J. Jones. 1999. Photoinhibition and photoprotection in symbiotic dinoflagellates from reef-building corals. Marine Ecology Progress Series 183:73-86. 1999 Australia Algae; Light; Special Use Permitting; Stony Coral
Kosarova, M., H. Havelkova, M. Krulova, P. Demant, and M. Lipoldova. 1999. The production of two Th2 cytokines interleukin-4 and interleukin-10, is controlled independently by locus Cypr1 and by loci Cypr2 and Cypr3, respectively. Immunogenetics 49:134-141. 1999 Special Use Permitting
Murray S. N., R. F. Ambrose, J. A. Bohnsack, L. W. Botsford, M. H. Carr, G. E. Davis, P. K. Dayton, D. Gotshall, G. R. Gunderson, M. A. Hixon, J. Lubcheco, M. Mangel, A. MacCall, D. A. McArdle, J. C. Ogden, J. Roughgarden, R. M. Starr, M. J. Tegner, and M. M. Yoklavisch. 1999. No-take reserve networks. Fisheries 24:11-25. 1999 Decision Support Frameworks & Tools Fishing Sector; Special Use Permitting
Nichols, K. 1999. Coming to terms with \Integrated Coastal Management\": Problems of meaning and method in a new arena of resource regulation". Professional Geographer 51:388-399. 1999 Global; Sri Lanka Review Special Use Permitting
Ralph, P. J., R. Gademann, A. W. D. Larkum, and U. Schreiber. 1999. In situ underwater measurements of photosynthetic activity of coral zooxanthellae and other reef-dwelling dinoflagellate endosymbionts. Marine Ecology Progress Series 180:139-147. 1999 Germany Anemones & Zooanthids; Dive, Snorkeling, & Swimming Tourism; Light; Primary Production; Special Use Permitting; Stony Coral; Zooxanthellae
Schmitt, R. J. and S. J. Holbrook. 1999. Mortality of juvenile damselfish: Implications for assessing processes that determine abundance. Ecology 80:35-50. 1999 Fish; Small Herbivorous Fish; Special Use Permitting
Titlyanov, E. A., T. V. Titlyanova, J. Tsukahara, R. Van Woesik, and K. Yamazato. 1999. Experimental increases of zooxanthellae density in the coral Stylophora pistillata elucidate adaptive mechanisms for zooxanthellae regulation. Symbiosis 26:347-362. 1999 Plankton; Primary Production; Special Use Permitting; Zooxanthellae
Zann, L. P. 1999. A new (old) approach to inshore resources management in Samoa. Ocean and Coastal Management 42:569-590. 1999 US Pacific & Hawaii; Australia; Samoa Model Commercial Fisheries; Cultural Policies; Environmental Monitoring, Mapping, & Scientific Research; Finfish Harvest; Fish; Fishing & Harvesting Management; Fishing Sector; Housing; Special Use Permitting; Wetlands
Chichilnisky, G. and G. Heal. 1998. Economic returns from the biosphere. Nature 391:629-630. 1998 China Banks, Credit, & Securities; Collaboration & Partnering; Landscape Conservation & Restoration; Monetary Valuation; Special Use Permitting
Christian, R., F. Steimle, and R. Stone. 1998. Evolution of marine artificial reef development-a philosophical review of management strategies. Gulf of Mexico Science 16:32-36. 1998 Review; Field Study & Monitoring; Decision Support Frameworks & Tools Artificial Habitat; Complex Habitat & Resources; Fishing Sector; Piscivorous Fish; Resource Use Management; Special Use Permitting
Demartini, E. E. 1998. How might recruitment research on coral-reef fishes help manage tropical reef fisheries? Austral Ecology 23:305-310. 1998 Finfish Harvest; Fishing Sector; Plankton; Special Use Permitting
Forest, N. B. 1998. Assessment of coastal regulations and implementation: case study of Roatan, Bay Islands, Honduras. Coastal Management 26:125-155. 1998 South & Central America; Honduras; Caribbean Model Special Use Permitting
Fouda, M. M., G. V. Hermosa Jr., and S. M. Al-Harthi. 1998. Status of fish biodiversity in the Sultanate of Oman. Italian Journal of Zoology 65:521-525. 1998 US Pacific & Hawaii; Oman Aquaculture; Commercial Fisheries; Finfish Harvest; Fish; Fishing & Harvesting Management; Fishing Sector; Natural Gas & Electric Power; Special Use Permitting
Gittings, S. R. 1998. Reef community stability on the Flower Garden Banks, northwest Gulf of Mexico. Gulf of Mexico Science 16:161-169. 1998 South & Central America; Mexico Field Study & Monitoring Accidental & Illegal Harvest; Anchoring & Vessel Grounding; Environmental Monitoring, Mapping, & Scientific Research; Finfish Harvest; Pathogens; Special Use Permitting; Trawling & Fishing Gear Damage
Hammer, O. 1998. Regulation of astogeny in halysitid tabulates. Acta Palaeontologica Polonica 43:635-651. 1998 Model Nutrients; Special Use Permitting; Sponges
Hixon, M. A. 1998. Population dynamics of coral-reef fishes: Controversial concepts and hypotheses. Austral Ecology 23:192-201. 1998 Field Study & Monitoring; Model Fish; Fishing Sector; Special Use Permitting
Jameson S. C., M. V. Erdmann, G. R. Gibson Jr., and K. W. Potts. 1998. Development of biological criteria for coral reef ecosystem assessment. Atoll Research Bulletin 450:1-102. 1998 Field Study & Monitoring; Lab Study Biocriteria; Biological Monitoring, Mapping, & Scientific Research; Environmental Monitoring, Mapping, & Scientific Research; Special Use Permitting
Kasprzak, R. A. 1998. Use of oil and gas platforms as habitat in Louisiana's artificial reef program. Gulf of Mexico Science 16:37-45. 1998 Artificial Habitat; Banks, Credit, & Securities; Coastal Defense; Corporate Responses; Finfish Harvest; Natural Gas & Electric Power; Oil & Gas Industry; Oil & Gas Rigs; Security Policies; Special Use Permitting; Utility Policies
Li, H., M. J. W. Veldhuis, and A. F. Post. 1998. Alkaline phosphatase activities among planktonic communities in the northern Red Sea. Marine Ecology Progress Series 173:107-115. 1998 Iran Index or Indicator Plankton; Special Use Permitting; Surface & Groundwater Flow
McConney, P. and R. Mahon. 1998. Introducing fishery management planning to Barbados. Ocean and Coastal Management 39:189-195. 1998 Review Collaboration & Partnering; Finfish Harvest; Fishing & Harvesting Management; Fishing Sector; Lobster, Crab, & Shrimp; Sea Urchins; Special Use Permitting
Meine, J. 1998. Automated vessel traffic management. Dock and Harbour Authority 78:247. 1998 Australia Shipping, Storage, & Warehousing; Special Use Permitting
Morris, G.L., Fan, J. 1998. Reservoir Sedimentation Handbook: Design and management of dams, reservoirs, and watersheds for sustainable use. Ver. 1.04 edition. McGraw-Hill, New York, NY. 1998 Puerto Rico; Costa Rica; Venezuela; India Model Agriculture; Dam Construction & Maintenance; Environmental Monitoring, Mapping, & Scientific Research; Forestry; Metals, Electronics, & Machinery Products; Nutrients; Sediment; Shoreline Protection; Special Use Permitting; Surface & Groundwater Flow; Tourism & Recreation; Water
NEPA. 1998. MARICULTURE DRAFT POLICY AND REGULATION NATURAL RESOURCES CONSERVATION AUTHORITY COASTAL ZONE MANAGEMENT DIVISION. National Environment & Planning agency. 1998 Decision Support Frameworks & Tools Aquaculture; Collaboration & Partnering; Finfish & Shellfish Stock; Finfish Harvest; Fishing Sector; Mangroves; Special Use Permitting; Wetlands
Planes, S., J.-Y. Jouvenel, and P. Lenfant. 1998. Density dependence in post-recruitment processes of juvenile sparids in the littoral of the Mediterranean Sea. Oikos 83:293-300. 1998 Fish; Plankton; Special Use Permitting
Pugliese, R. 1998. Final habitat plan for the South Atlantic Region. South Atlantic Fishery Management Council, Charleston, SC. 1998 Florida; US East Coast (NC, SC, GA) Field Study & Monitoring; Model Accidental & Illegal Harvest; Agriculture; Aquaculture; Commercial Fisheries; Dredging Regulations; Dredging, Draining, & Filling; Finfish Harvest; Fishing Sector; Fleshy Macroalgae; Invertebrate Harvest; Lobster, Crab, & Shrimp; Mangroves; Monetary Valuation; Nutrients; Oil & Gas Research & Exploration; Piscivorous Fish; Recreational Fishing; Seagrasses; Special Use Permitting; Tourism & Recreation; Tourism & Recreation Policies; Trawling & Fishing Gear Damage
Schussler, F. 1998. Many possibilities for platforms past their prime. Scandinavian Oil - Gas Magazine 26:101-102. 1998 Europe Special Use Permitting
Worheide, G. 1998. The reef cave dwelling ultraconservative coralline demosponge Astrosclera willeyana Lister 1900 from the Indo-Pacific. Facies 38:Jan-88. 1998 US Pacific & Hawaii; Australia Calcium Carbonate Deposition; CO2; Deforestation & Devegetation; Microorganisms; Special Use Permitting; Sponges; Surface & Groundwater Flow
Beukers, J. S. and G. P. Jones. 1997. Habitat complexity modifies the impact of piscivores on a coral reef fish population. Oecologia 114:50-59. 1997 Australia Field Study & Monitoring; Lab Study Apex Fish Predators; Complex Habitat & Resources; Fish; Small Herbivorous Fish; Special Use Permitting; Stony Coral
Daily, G. C., S. Alexander, P. R. Ehrlich, L. Goulder, J. Lubchenco, P. A. Matson, H. A. Mooney, S. Postel, S. H. Schneider, D.Tilman, and G. M. Woodwell. 1997. Ecosystem services: benefits supplied to human societies by natural ecosystems. Issues in Ecology 1:1-18. 1997 Global Field Study & Monitoring Agriculture; Climate; Economic Markets & Policies; Forestry; Microorganisms; Nutrients; Pharmaceuticals & Cosmetics; Pharmaceuticals & Cosmetics Sources; Special Use Permitting
Fontaine, M. 1997. Ethics, bioethics and medical sciences [ethique, bioethique(s) et sciences medicales]. Bulletin de l'Academie Nationale de Medecine 181:1477-1486. 1997 Health Policies; Landscape Conservation & Restoration; Special Use Permitting
Goiran, C., D. Allemand, and I. Galgani. 1997. Transient Na+ stress in symbiotic dinoflagellates after isolation from coral-host cells and subsequent immersion in seawater. Marine Biology 129:581-589. 1997 Cuba Special Use Permitting; Stony Coral; Zooxanthellae
Grossman, G. D., G. P. Jones, and W. J. Seaman Jr. 1997. Do artificial reefs increase regional fish production? A review of existing data. Fisheries 22:17-23. 1997 Review Artificial Habitat; Finfish Harvest; Special Use Permitting
Hixon, M. A. and M. H. Carr. 1997. Synergistic predation, density dependence, and population regulation in marine fish. Science 277:946-949. 1997 Field Study & Monitoring; Model Finfish Harvest; Special Use Permitting
Jones, R. J. and D. Yellowlees. 1997. Regulation and control of intracellular algae ( = zooxanthellae) in hard corals. Philosophical Transactions of the Royal Society B: Biological Sciences 352:457-468. 1997 Model; Index or Indicator Algae; Nutrients; Special Use Permitting; Stony Coral; Zooxanthellae
Liao, I. C. 1997. Status, problems and prospects of stock enhancement in Taiwan. Hydrobiologia 352:167-180. 1997 Japan; Taiwan Artificial Habitat; Finfish Harvest; Fish; Fishing Sector; Lobster, Crab, & Shrimp; Molluscs; Special Use Permitting
Mcclanahan, T. R., H. Glaesel, J. Rubens, and R. Kiambo. 1997. The effects of traditional fisheries management on fisheries yields and the coral-reef ecosystems of southern Kenya. Environmental Conservation 24:105-120. 1997 Kenya Cultural Policies; Cultural Protections; Finfish Harvest; Fish; Fishing & Harvesting Management; Fishing Sector; Marine Protected Areas; Special Use Permitting; Trawling & Fishing Gear Damage
Steele, M. A. 1997. Population regulation by post-settlement mortality in two temperate reef fishes. Oecologia 112:64-74. 1997 Special Use Permitting
Tanner, J. E. 1997. The effects of density on the zoanthid Palythoa caesia. Journal of Animal Ecology 66:793-810. 1997 Model Anemones & Zooanthids; Special Use Permitting
Alder, J. 1996. Costs and effectiveness of education and enforcement, cairns section of the Great Barrier Reef Marine Park. Environmental Management 20:541-551. 1996 Australia Decision Support Frameworks & Tools Marine Protected Areas; Special Use Permitting
Caley, M. J., M. H. Carr, M. A. Hixon, T. P. Hughes, G. P. Jones, and B. A. Menge. 1996. Recruitment and the local dynamics of open marine populations. Annual Review of Ecology and Systematics 27:477-500. 1996 Invertebrates; Plankton; Special Use Permitting
David, J. A. and R. M. Pitman. 1996. Cyclic-AMP regulation of calcium-dependent K channels in an insect central neurone. Neuroscience Letters 203:151-154. 1996 Special Use Permitting
Jennings, S., S. S. Marshall, and N. V. C. Polunin. 1996. Seychelles' marine protected areas: Comparative structure and status of reef fish communities. Biological Conservation 75:201-209. 1996 Seychelles Accidental & Illegal Harvest; Complex Habitat & Resources; Finfish Harvest; Fish; Fishing Sector; Marine Protected Areas; Special Use Permitting; Tourism & Recreation
Macdonald, J. C. 1996. The Australian REEFREP system: A coastal vessel traffic information service and ship reporting system for the Torres Strait region and the inner route of the Great Barrier Reef. Journal of Navigation 49:299-308. 1996 Australia Infrastructure; Shipping, Storage, & Warehousing; Special Use Permitting
McClanahan, T. R. and B. Kaunda-Arara. 1996. Fishery recovery in a coral-reef marine park and its effect on the adjacent fishery [Recuperacion de pesquerias en un parque marino de arrecife coralino]. Conservation Biology 10:1187-1199. 1996 Kenya Field Study & Monitoring Finfish Harvest; Fish; Fishing Sector; Marine Protected Areas; Sea Urchins; Small Herbivorous Fish; Special Use Permitting
Titlyanov, E. A., T. V. Titlyanova, V. A. Leletkin, J. Tsukahara, R. Van Woesik, and K. Yamazato. 1996. Degradation of zooxanthellae and regulation of their density in hermatypic corals. Marine Ecology Progress Series 139:167-178. 1996 Special Use Permitting; Zooxanthellae
Van Tussenbroek, B. I. 1996. Integrated growth patterns of turtle grass, Thalassia testudinum Banks ex Konig. Aquatic Botany 55:139-144. 1996 South & Central America; Caribbean Special Use Permitting
Willis, T. J. and C. D. Roberts. 1996. Recolonisation and recruitment of fishes to intertidal rockpools at Wellington, New Zealand. Environmental Biology of Fishes 47:329-343. 1996 Fish; Special Use Permitting
Breen, M. 1995. New technologies and techniques in underwater science. Underwater Technology 21:43-47. 1995 Mauritius Index or Indicator Finfish Harvest; Fish; Special Use Permitting; Trawling & Fishing Gear Damage
Chopin, L. K. and M. B. Bennett. 1995. The regulation of branchial blood flow in the blacktip reef shark, Carcharhinus melanopterus (Carcharhinidae: Elasmobranchii). Comparative Biochemistry and Physiology Part A 112:35-41. 1995 Special Use Permitting; Surface & Groundwater Flow
Avent, R. M. and R. M. Rogers. 1994. Sensitive Biological Habitats and Resources in the Gulf of Mexico: Environment Issues and Concerns for the Regulation of the Petroleum Industry. Pages 445-453 in Drilling Conference - Proceedings. 1994 South & Central America; Mexico Designate Protected Species; Seagrasses; Special Use Permitting
Gabrie, C., S. Planes, J. Baldwin, J. Bonvallot, C. Chauvet, Y. Vernaudon, C. Payri, and R. Galzin. 1994. Study of the coral reefs of Bora-Bora (society archipelago, French Polynesia) for the development of a conservation and management plan. Ocean and Coastal Management 25:189-216. 1994 Field Study & Monitoring Resource Use Management; Special Use Permitting
Gittings, S. R., T. J. Bright, and D. K. Hagman. 1994. Protection and monitoring of reefs on the Flower Garden Banks, 1972- 1992. Pages 181-187 in Proceedings of the colloquium on global aspects of coral reefs, Miami, 1993. 1994 Global; South & Central America; Mexico Field Study & Monitoring Discharge Limitations; Discharges; Sea Urchins; Special Use Permitting
Macdonald, J. M. 1994. Artificial reef debate: habitat enhancement or waste disposal? Ocean Development and International Law 25:87-118. 1994 Artificial Habitat; Fishing Sector; Special Use Permitting
Marion, J. L. and C. S. Rogers. 1994. The applicability of terrestrial visitor impact management strategies to the protection of coral reefs. Ocean and Coastal Management 22:153-163. 1994 US Virgin Islands Review Special Use Permitting; Tourism & Recreation
Piot, BE RN AR D, RE MI Ferriere, and BE RN AR D Fraboulet. 1994. Unique experience with foamed cement. Pages 127-142 in European Petroleum Conference - Proceedings. 1994 Europe Lab Study; GIS & Maps Nutrients; Special Use Permitting
Richards, A. H., L. J. Bell, and J. D. Bell. 1994. Inshore fisheries resources of Solomon Islands. Marine Pollution Bulletin 29:90-98. 1994 Solomon Islands Aquaculture; Echinoderms; Fish; Fishing Sector; Snails & Conch; Special Use Permitting
Boehlert, G. W. 1993. Fisheries of Hawaii and US-associated Pacific islands. Marine Fisheries Review 55. 1993 US Pacific & Hawaii; Samoa; American Samoa; Guam Designate Protected Species; Fishing Sector; Lobster, Crab, & Shrimp; Piscivorous Fish; Recreational Fishing; Special Use Permitting; Tourism & Recreation
Freiwald, A. 1993. Coralline algal maerl frameworks-Islands within the phaeophytic kelp belt. Facies 29:133-148. 1993 Global; Norway Algae; Coralline Algae; Microorganisms; Nutrients; Sea Urchins; Special Use Permitting; Stony Coral; Storms & Hurricanes
Leinfelder, R. and H. Seyfried. 1993. Sea level change: a philosophical approach. Geologische Rundschau 82:159-172. 1993 Global Model Climate; CO2; Coal Mining; Greenhouse Gas Emissions; Special Use Permitting; Water Depth & Sea Level
Pankhurst, N. W. and C. W. Barnett. 1993. Relationship of population density, territorial interaction and plasma levels of gonadal steroids in spawning male demoiselles Chromis dispilus (pisces: pomacentridae). General and Comparative Endocrinology 90:168-176. 1993 Cuba Fish; Small Herbivorous Fish; Special Use Permitting
Carpenter, E. J., D. G. Capone, and J. G. Rueter. 1992. Marine pelagic cyanobacteria: Trichodesmium and other diazotrophs. Marine pelagic cyanobacteria: Trichodesmium and other diazotrophs. 1992 South & Central America; US Pacific & Hawaii; Australia; Thailand; Caribbean; Germany Remote Sensing Cyanobacteria; Microorganisms; Nutrients; Special Use Permitting
Dasinger, AN DR EW and DO NA LD Galya. 1992. Application for a mixing zone authorization for the ocean discharge of once-through cooling water in Puerto Rico. Pages 605-610 in National Conference on Environmental Engineering. 1992 Puerto Rico Review; Field Study & Monitoring; Model Discharge Limitations; Discharges; Physical & Chemical Water Quality Criteria; Special Use Permitting
Edwards, A. J. and A. D. Shepherd. 1992. Environmental implications of aquarium-fish collection in the Maldives, with proposals for regulation. Environmental Conservation 19:61-72. 1992 Maldives Aquarium & Pet Trade; Aquarium Stock; Fish; Special Use Permitting
Glenn, E. P. and M. S. Doty. 1992. Water motion affects the growth rates of Kappaphycus alvarezii and related red seaweeds. Aquaculture 108:233-246. 1992 Special Use Permitting
Spadoni Richard, H. 1992. Monitoring of the 1988 Boca Raton beach nourishment project. Pages 120-136 in [No source information available]. 1992 Florida Field Study & Monitoring Artificial Habitat; Environmental Monitoring, Mapping, & Scientific Research; Mitigation; Special Use Permitting
Ahmed, F. E. 1991. Naturally occurring seafood toxins. Journal of Toxicology - Toxin Reviews 10:263-287. 1991 Commercial Fisheries; Finfish Harvest; Pathogens; Special Use Permitting; Tourism & Recreation
Cardwell, J. R. and N. R. Liley. 1991. Androgen control of social status in males of a wild population of stoplight parrotfish, Sparisoma viride (Scaridae). Hormones and Behavior 25:18-Jan. 1991 South & Central America; Belize Corallivorous Fish; Fish; Large Herbivorous Fish; Special Use Permitting
McClanaban, T. R. 1991. Population regulation of the rock-boring sea urchin Echinometra mathaei (de Blainville). Journal of Experimental Marine Biology and Ecology 147:121-146. 1991 Index or Indicator Calcium Carbonate Deposition; Fish; Sea Urchins; Small Herbivorous Fish; Special Use Permitting
Ross, KE N. 1991. Salvage in the oceanic region. Pages 173-177 in International Tug Convention (Proceedings). 1991 Special Use Permitting
Ebeling, A. W., S. J. Holbrook, and R. J. Schmitt. 1990. Temporally concordant structure of a fish assemblage: bound or determined? American Naturalist 135:63-73. 1990 Model Fish; Special Use Permitting
Harland, A. D. and N. R. Nganro. 1990. Copper uptake by the sea anemone Anemonia viridis and the role of zooxanthellae in metal regulation. Marine Biology 104:297-301. 1990 Algae; Anemones & Zooanthids; Special Use Permitting; Zooxanthellae
Rountree, R. A. 1990. Community structure of fishes attracted to shallow water fish aggregation devices off South Carolina, U.S.A. Environmental Biology of Fishes 29:241-262. 1990 US East Coast (NC, SC, GA) Artificial Habitat; Fish; Special Use Permitting; Storms & Hurricanes
del Norte, A. G. C., C. L. Nanola, J. W. McManus, R. B. Reyes, W. L. Campos, and J. B. P. Cabansag. 1989. Overfishing on a Philippine coral reef: a glimpse into the future. Pages 3087-3097 in Coastal Zone: Proceedings of the Symposium on Coastal and Ocean Management. 1989 Philippines Review Finfish Harvest; Fish; Fishing Sector; Special Use Permitting
Hinrichsen, D. 1989. Coping with pollution in Indonesia. Earthwatch 35:8-Jun. 1989 Indonesia Aquaculture; Banks, Credit, & Securities; Finfish Harvest; Lobster, Crab, & Shrimp; Mangroves; Microorganisms; Sediment; Special Use Permitting; Wastewater Discharge
Preu, C. 1989. Problems of recent morphodynamics of the Sri Lankan coast [Zur problematik der rezenten morphodynamik an den kusten Sri Lankas]. Erdkundliches Wissen 97:23-42. 1989 Sri Lanka Banks, Credit, & Securities; Finfish Harvest; Special Use Permitting; Tourism & Recreation
[No author name available]. 1988. Refuse-to-reefs: old platforms process drilling wastes, garbage. Offshore 49. 1988 South & Central America; Mexico Artificial Habitat; Special Use Permitting
Anon,. 1988. Marine Board Reports On Catamaran Fire. High-speed surface craft 27:9-Aug. 1988 Australia Special Use Permitting
Mapstone, B. D. and A. J. Fowler. 1988. Recruitment and the structure of assemblages of fish on coral reefs. Trends in Ecology and Evolution 3:72-77. 1988 Review Fish; Special Use Permitting
McManus, J. W. 1988. Coral reefs of the ASEAN Region: status and management. Ambio 17:189-193. 1988 Southeast Asia Field Study & Monitoring City Planning; Deforestation & Devegetation; Environmental Monitoring, Mapping, & Scientific Research; Finfish Harvest; Fishing Sector; Sediment; Special Use Permitting
Thornton, W. L. and J. C. Quigel. 1988. Case history for rigs to reefs: a cost-effective alternative for platform abandonment. Pages 543-552 in IN: OTC '88 PROC. TWENTIETH ANNUAL OFFSHORE TECHNOL. CONF., (HOUSTON, U.S.A.: MAY 2-5, 1988). 1988 Special Use Permitting
Catmull, J., D. Yellowlees, and D. J. Miller. 1987. NADP+-dependent glutamate dehydrogenase from Acropora formosa: purification and properties. Marine Biology 95:559-563. 1987 Index or Indicator Nutrients; Special Use Permitting; Stony Coral; Substrate
Lewis, S. M., J. N. Norris, and R. B. Searles. 1987. The regulation of morphological plasticity in tropical reef algae by herbivory. Ecology 68:636-641. 1987 South & Central America; Caribbean Algae; Complex Habitat & Resources; Corallivorous Fish; Fish; Large Herbivorous Fish; Small Herbivorous Fish; Special Use Permitting
Matthews, D. 1987. From rigs to reefs. LAMP 69:-2. 1987 South & Central America; Mexico Artificial Habitat; Commercial Fisheries; Finfish Harvest; Fishing Sector; Recreational Fishing; Special Use Permitting; Tourism & Recreation
McCallum, H. I. 1987. Predator regulation of Acanthaster planci. Journal of Theoretical Biology 127:207-220. 1987 US Pacific & Hawaii Field Study & Monitoring; Model Seastars; Special Use Permitting
Uthoff, D. 1987. Man-induced coastal disturbance on the 'dream beachs' of Sri Lanka: causes and consequences [Anthropogen induzierte Kustenzerstorung an den 'Traumstranden' Sri Lankas: Ursachen und Folgen]. Berliner Geographische Studien 25:403-419. 1987 Sri Lanka Beaches & Nature Parks; Special Use Permitting; Surface & Groundwater Flow
Archer, E. 1985. Emerging environmental problems in a tourist zone: the case of Barbados. Caribbean Geography 2:45-55. 1985 South & Central America; Caribbean Nutrients; Special Use Permitting; Tourism & Recreation
Benayahu, Y. and Y. Loya. 1985. Settlement and recruitment of a soft coral: why is Xenia macrospiculata a successful colonizer? Bulletin of Marine Science 36:177-188. 1985 Octocoral; Special Use Permitting; Substrate
Stoddard, AN DR EW, RO GE R Wells, and KI M Devonald. 1985. Development And Application Of A Deepwater Ocean Waste Disposal Model For Dredged Material: Yabucoa Harbor, Puerto Rico. Marine Technology Society Journal 19:26-39. 1985 Puerto Rico Model Dredging Regulations; Dredging, Draining, & Filling; Sediment; Special Use Permitting
Campbell Thomas, J. and KI M Beachler. 1984. Engineering For Beach Restoration Dredging. Pages 1014-1023 in [No source information available]. 1984 Florida Review Beaches & Nature Parks; Dredging Regulations; Dredging, Draining, & Filling; Shoreline Protection; Special Use Permitting; Storms & Hurricanes; Tourism & Recreation
Grigg, R. W., J. J. Polovina, and M. J. Atkinson. 1984. Model of a coral reef ecosystem - III. Resource limitation, community regulation, fisheries yield and resource management. Coral Reefs 3:23-27. 1984 Field Study & Monitoring; Model; Decision Support Frameworks & Tools Fishing Sector; Nutrients; Primary Production; Resource Use Management; Special Use Permitting
Kiefer, D. A. and B. G. Mitchell. 1983. A simple, steady state description of phytoplankton growth based on absorption cross section and quantum efficiency. Limnology and Oceanography 28:770-776. 1983 Model Light; Nutrients; Plankton; Special Use Permitting
Reynolds, W. W. and M. E. Casterlin. 1981. Behavioral thermoregulatory abilities of tropical coral reef fishes: a comparison with temperate freshwater and marine fishes. Environmental Biology of Fishes 6:347-349. 1981 US Pacific & Hawaii Small Herbivorous Fish; Special Use Permitting
Reynolds, W. W. and M. E. Casterlin. 1981. Thermoregulatory behavior of the triggerfish Balistes fuscus in an electronic shuttlebox. Hydrobiologia 83:255-256. 1981 Fish; Invertivorous Fish; Special Use Permitting
Sikes, C. S., K. Okazaki, and R. D. Fink. 1981. Respiratory CO2 and the supply of inorganic carbon for calcification of sea urchin embryos. Comparative Biochemistry and Physiology Part A 70:285-291. 1981 Cuba Calcium Carbonate Deposition; CO2; Molluscs; Sea Urchins; Special Use Permitting; Substrate
Anderson, R. M. and R. M. May. 1980. Infectious diseases and population cycles of forest insects. Science 210:658-661. 1980 Model Pathogens; Special Use Permitting
Collins, N. 1980. Population ecology of Ephydra cinerea Jones (Diptera: Ephydridae), the only benthic metazoan of the Great Salt Lake, U.S.A. Hydrobiologia 68:99-112. 1980 Algae; Nutrients; Plankton; Primary Production; Salinity; Special Use Permitting; Substrate
Gilligan, M. R. 1980. Beta diversity of a Gulf of California rocky-shore fish community. Environmental Biology of Fishes 5:109-116. 1980 Fish; Sea Temperatures; Special Use Permitting
Pudlo, R. J., A. J. Beattie, and D. C. Culver. 1980. Population consequences of changes in an ant-seed mutualism in Sanguinaria canadensis. Oecologia 46:32-37. 1980 Model Special Use Permitting
Medvick, P. A. and J. M. Miller. 1979. Behavioral thermoregulation in three Hawaiian reef fishes. Environmental Biology of Fishes 4:23-28. 1979 US Pacific & Hawaii Fish; Small Herbivorous Fish; Special Use Permitting
Goreau, T. J. 1977. Coral skeletal chemistry: physiological and environmental regulation of stable isotopes and trace metals in Montastrea annularis. Pages 291-315 in Proceedings of the Royal Society of London - Biological Sciences. 1977 Special Use Permitting
Hayes, R. L. and N. I. Goreau. 1977. Intracellular crystal-bearing vesicles in the epidermis of scleractinian corals, Astrangia danae (Agassiz) and Porites porites (Pallas). Biological Bulletin 152:26-40. 1977 Discharge Limitations; Discharges; Special Use Permitting; Stony Coral
Smith, Nathan and Howard M. Lenhoff. 1976. Regulation of frequency of pedal laceration in a sea anemone. Pages 117-26 in Mackie, editor. Coelenterate Ecology and Behavior,. University of Victoria, British Columbia. 1976 Anemones & Zooanthids; Special Use Permitting
Tricart, J. 1967. Certaines formes de sedimentation calcaire quaternaires sont-elles dues à des desequilibres geochimiques periodiques? Chemical Geology 2:233-248. 1967 South & Central America; Mexico Model Algae; Climate; CO2; Sea Temperatures; Sediment; Special Use Permitting
Robertson, James D. 1957. Recent Advances in Invertebrate Physiology: A Symposium University of Oregon Publishing: Eugene. 1957 Invertebrates; Special Use Permitting
Mork, E., G. L. Sjoo, N. Kautsky, and T. R. McClanahan. Top-down and bottom-up regulation of macroalgal community structure on a Kenyan reef. Estuarine Coastal and Shelf Science Kenya Algae; Fertilizer & Pesticide Use; Fish; Large Herbivorous Fish; Nutrients; Sea Urchins; Small Herbivorous Fish; Special Use Permitting
Office of Surface Mining Reclamation and Enforcement. POSTMINING LAND USE: Exceptions to Approximate Original Contour Requirements for Mountaintop Removal Operations and steep Slope Mining Operations. Washington, DC. Mining; Mining Policies; Special Use Permitting
O'Garra, T. ESTIMATING THE TOTAL ECONOMIC VALUE (TEV) OF THE NAVAKAVU LMMA (Locally Managed Marine Area) in Vitu Levu island (Fiji). Coral Reef Initiatives for the Pacific. US Pacific & Hawaii; Australia; Fiji Finfish Harvest; Fish; Fishing Sector; Housing; Monetary Valuation; Shoreline Protection; Special Use Permitting; Valuation
Santos, R. S., S. Christiansen, B. Christiansen, and S. Gubbay. Toward the conservation and management of Sedlo Seamount: A case study. Deep-Sea Research Part II: Topical Studies in Oceanography Global; US East Coast (NC, SC, GA) Review Fishing Sector; Marine Protected Areas; Special Use Permitting

Management Options

Management Option Description Sources Database Topics
Damage Assessment, Documentation & Response: Operating Permits for Towing & Salvage Professionals This management option evaluates the need for a permitting system for all towing and salvage operations. This type of permit would require salvage operators to notify injury response when there are groundings. The permit program would also reduce impacts by ensuring operators know the proper practices and use the proper equipment to most effectively minimize damage to the operating area. NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Anchoring & Vessel Grounding; Boat Movement; Boating Activities; Boating Regulations; Contact Uses; Dredging Regulations; Physical Damage; Resource Use Management; Special Use Permitting; Water Transportation
Damage Assessment, Documentation & Response: Respond to Natural Resource Injuries from Natural Physical Disturbance There are currently no standardized or uniform protocols to follow after natural or catastrophic events (such as hurricanes). Such protocols need to be developed in order to respond to specific issues that follow catastrophic natural events. NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Biological Monitoring & Restoration; Biological Monitoring, Mapping, & Scientific Research; Climate; Dredging Regulations; Ecosystem Monitoring & Restoration; Environmental Monitoring & Restoration; Environmental Monitoring, Mapping, & Scientific Research; Physical & Chemical Environment; Physical Damage; Physical Variables; Resource Use Management; Special Use Permitting; Storms & Hurricanes; Wetland & Reef Restoration
Damage Assessment, Documentation & Response: Respond to Natural Resource Injuries from Coastal Construction & Development This involves assessing coral, seagrass, and hard bottom substrate that is impacted during coastal construction repair or alternation. If unacceptable damages are occurring this information will be useful in future permit decision making. If infringements have occurred, this information may be useful for compensatory mitigation and liability for restoration of those natural resources injured. NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Biological Monitoring & Restoration; Civil Engineering & Construction; Coastal Development; Coastal Engineering; Construction Codes & Projects; Docks & Marinas; Dredging Regulations; Dredging, Draining, & Filling; Ecosystem Monitoring & Restoration; Environmental Monitoring & Restoration; Impervious Surfaces; Infrastructural Policies; Infrastructure; Land-Based Civil Engineering; Landscape Changes; Mangroves; Mitigation; Permitting & Zoning; Physical Damage; Physical Variables; Ports & Harbors; Reef Habitat; Remediation; Resource Use Management; Seagrasses; Shoreline Armoring; Special Use Permitting; Utilities; Utility Line Construction & Maintenance; Wetland & Reef Restoration; Wetlands
Enforcement: Enforce Statues, Regulation and Permit Requirements This option ensures compliance with statues, regulations, and permit requirements. This is accomplished through intensive on-site patrols by authorized law enforcement officers. Agencies at the state level as well as NOAA can assist with enforcement. For success, it is important that law enforcement be trained in the compliance requirements of other agencies (e.g. Marine Heritage Resource (MHR) permitting compliance). A standardized training program to help better ensure cross- deputization of enforcement agencies would be necessary. NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Boating Regulations; Collaboration & Partnering; Cultural Protections; Dredging Regulations; Fisheries & Hunting Policies; Fishing & Harvesting Management; Permitting & Zoning; Resource Use Management; Security & Public Administration Policies; Special Use Permitting
Marine Zoning: Integrate Resource Information in Permits, Authorizations, or Certifications Permitting usually includes assessing the natural and cultural resources of an area. Using this previosly gathered data would aid in creating an inventory for marine resources. If previosuly established, the management option (#165), will allow this data to be combined with data from other inventory management options such as (#95), and future integration into larger databases, such as that in the management option (#85). NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Boating Regulations; Collaboration & Partnering; Construction Codes & Projects; Decision Support; Designated Uses; Permitting & Zoning; Resource Use Management; Special Use Permitting
Marine Zoning: Permitting Application & Award This management approach is important because permits assure protection and conservation of coral resources from harmful activities and practices. Within sanctuary waters, special use permits (#157) can be used to allow scientists and others to conduct necessary work while following permitting regulations to reduce the impact of that work. General permits are often required for altering land-use, construction projects and certain discharges. To be eligible for a permit, the operator may be required to conduct impact assessments, institute best management practices and conduct monitoring of the project. Though permits are a necessary precaution, the process can be streamlined through ensuring clear submittal requirements, and reducing redundancy. Redundancy often occurs when multiple agencies must approve a permit, a single point of contact and standard, inter-agency protocols can reduce unnecessary redundancy. NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Biological Addition; Biological Harvest; Building & Home Construction; Coastal Development; Collaboration & Partnering; Cultural Policies; Discharges; Dredging, Draining, & Filling; Impervious Surfaces; Land-Based Civil Engineering; Landscape Changes; Landuse Management; Permitting & Zoning; Physical Damage; Point Source Discharges; Public Administration; Resource Use Management; Scientific Research; Security & Public Administration Policies; Special Use Permitting
Marine Zoning: Utilize Marine Protected Areas for Research and Monitoring Research and monitoring of marine protected areas determine the degree to which the zones meet goals and objectives for protecting natural resources, as well as human-use patterns, attitudes and compliance. Once data is gathered from within the protected zone it can than be compared to comprable data from outside the protected zone, as a control. It is necessary to compile and review data on use patterns to determine where additional Special-Use Areas would be appropriate. Research in the protected area should be non-invasive. It is important to make the protected area available for external research as well. NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Biological Harvest; Biological Monitoring & Restoration; Biological Monitoring, Mapping, & Scientific Research; Collaboration & Partnering; Contact Uses; Decision Support; Designated Uses; Discharges; Ecosystem Monitoring & Restoration; Educational & Research Opportunities; Environmental Monitoring & Restoration; Fish; Invasive Species; Invertebrates; Landscape Changes; Marine Protected Areas; Marine Vertebrates; Permitting & Zoning; Physical Damage; Resource Use Management; Special Use Permitting; Wetlands
Marine Zoning: Special Use Areas Special use areas are set aside for specific scientific or educational purposes. This is in order to encourage the recovery or restoration of injured or degraded resources. Also, the areas may be designated to facilitate access to, or use of, resources, and prevent other user conflicts. Special-use areas are achieved through a variety of methods such as: placing/maintaining buoys along zone boundaries; adjusting boundaries if necessary; evaluating allowable activities within zone boundaries; identifying potential areas that need additional zoning; reviewing the effectiveness of the zoning; and revising NOAA and GIS charts; and determining/establishing appropriate zones for high-impact or user-conflict activities. NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Biological Addition; Biological Harvest; Biological Monitoring & Restoration; Biological Monitoring, Mapping, & Scientific Research; Biomedical Research Policies; Complex Habitat & Resources; Contact Uses; Cultural Services; Decision Support; Designated Uses; Ecosystem Monitoring & Restoration; Education & Information; Educational & Research Opportunities; Environmental Education & Outreach; Environmental Monitoring & Restoration; Environmental Monitoring, Mapping, & Scientific Research; Health Policies; Marine Protected Areas; Permitting & Zoning; Physical Damage; Provisioning Services; Resource Use Management; Scientific Research; Social Organizations; Special Use Permitting; Supporting Services; Wetland & Reef Restoration
Marine Zoning: Special Use Permit This permit allows otherwise prohibited activities to take place within sanctuaries. For example researchers may be able to perform certain activities if the research is beneficial to research and monitoring. NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Office of National Marine Sanctuaries. Special Use Permits. National Marine Sanctuaries Accessed 6/13/2011.

Contact Uses; Environmental Monitoring, Mapping, & Scientific Research; Reef Life; Resource Use Management; Special Use Permitting
Marine Zoning: Utilize fully protected marine zones as research areas For all three types of fully protected marine zones, permitted researches may conduct non-invasive experiments to address management strategies. NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Contact Uses; Pressures; Resource Use Management; Responses; Special Use Permitting
Monitor & Research: Utilize Managed Areas for Socioeconomic Research Data are needed to test hypotheses about the socioeconomic impact of marine zoning and user-group perceptions about changes in natural resources within the sanctuary area. User-group perception of changes in natural resources can be compared with quantitative ecological data to identify misconceptions and knowledge gaps. Providing funding opportunities for external scientists to conduct research in the managed area is another option. NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Contact Uses; Cultural Services; Culture; Decision Support; Designated Uses; Economic Markets & Policies; Ecosystem Monitoring & Restoration; Educational & Research Opportunities; Environmental Education & Outreach; Food & Raw Materials; Infrastructural Policies; Landuse Management; Marine Protected Areas; Monetary Valuation; Non-Monetary Valuation; Permitting & Zoning; Provisioning Services; Reef Habitat; Reef Inhabitants; Regulating Services; Resource Use Management; Special Use Permitting; Supporting Services; Valuation
Monitor & Research: Develop Scientific Research Study Program Management areas can encourage scientific studies by coordinating efforts of research groups and institutions. Collaboration and integration of these scientific studies can be beneficial to both the research groups and the management area. For example, data from monitoring of restoration projects could be analyzed by an academic institution, helping to reduce the burden on funds and perhaps using data in ways outside the scope of management objectives. NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Biological Monitoring & Restoration; Biological Monitoring, Mapping, & Scientific Research; Biomedical Research Policies; Collaboration & Partnering; Cultural Policies; Cultural Services; Decision Support; Ecosystem Monitoring & Restoration; Ecosystem Services; Education & Information; Educational & Research Opportunities; Environmental Education & Outreach; Environmental Monitoring & Restoration; Environmental Monitoring, Mapping, & Scientific Research; Resource Use Management; Schools & Colleges; Scientific Research; Security & Public Administration Policies; Special Use Permitting
Regulatory Review and Development: Evaluate Dredging Regulations Dredging is oftentimes prohibited with certain exceptions. Dredging regulation often falls under other controls over the alteration of the seabed, discharging or depositing materials. At times dredging is necessary for navigation or other activities, necessitating .permitting mechanisms for allowing otherwise prohibited activities. Revising the regulations to help eliminate negative dredge-and-fill activities within a certain distance of corals would be beneficial because it would help promote the reestablishment of sensitive benthic communities. Reservoirs may require periodic dredging to remove sediment that may have collected. NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Beach & Land Formation; Beaches & Nature Parks; Biological Monitoring & Restoration; Coastal Engineering; Construction Codes & Projects; Dam Construction & Maintenance; Decision Support; Discharge Limitations; Docks & Marinas; Dredging Regulations; Dredging, Draining, & Filling; Ecosystem Monitoring & Restoration; Hydrologic Management; Mining; Mining Policies; Physical Damage; Point Source Discharges; Ports & Harbors; Provisioning Services; Resource Use Management; Sand & Rock Production; Security & Public Administration Policies; Special Use Permitting; Substrate; Transportation; Utility Line Construction & Maintenance; Water Transportation
Regulatory Review and Development: Evaluate Artificial Reef Regulations Discharge/depositing of materials and constructions on the seabed are both prohibited without permits, regulating the construction of new artificial reefs. Likewise, existing artificial reefs are protected through permit requirements for any alternation of the seabed. There are still further considerations for protecting artificial reefs. Artificial reef materials and construction choices are very important and may change based on the specific location and desired impacts. An artificial reef to attract recreational fishing differs from one for recreational divers or shoreline storm protection. Many artificial reefs were formally large ships, oil rigs or other types of waste that have been decommissioned and would be too large and expensive to dismantle on land. In these cases it is important to put restrictions on the sinking process to ensure there won�t be any type of chemical leakage and that the structure is stable on the seabed. (#189) (#190) National Oceanic and Atmospheric Administration. 2007. National Artificial Reef Plan: Guidelines for Siting, Construction, Development, and Assessment of Artificial Reefs. US Department of Commerce.

NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Artificial Habitat; Coastal Defense; Contact Uses; Discharge Limitations; Discharges; Dive, Snorkeling, & Swimming Tourism; Dredging Regulations; Environmental Monitoring & Restoration; Large Ships; Oil & Gas Industry; Permitting & Zoning; Physical Damage; Recreational Fishing; Solid Waste Disposal; Special Use Permitting; Tourism & Recreation; Waste Management; Waterborne Discharges
Resource Use Management: Fisheries Management Enforcement Marine protected areas and other types of coastal zone management areas have fisheries management policies that must be enforced in addition to the broader Statues, Regulation and Permit Requirements (#91). Illegal, unregulated and unreported (IUU) fishing is a major problem worldwide. Management area policies must be enforced to have an impact on the fisheries stock. Accidental & Illegal Harvest; Artisanal Fishing; Biological Harvest; Boating Activities; Boating Regulations; Commercial Fisheries; Decision Support; Designated Uses; Ecosystem Monitoring & Restoration; Finfish Harvest; Fishing & Harvesting Management; Fishing Sector; Invertebrate Harvest; Live Collection; Marine Protected Areas; Mitigation; Permitting & Zoning; Physical Damage; Public Administration; Recreational Fishing; Resource Use Management; Security Policies; Special Use Permitting; Tourism & Recreation; Trawling & Fishing Gear Damage
Resource Use Management: Designated Uses The water quality standards regulation requires that States and Tribes specify appropriate water uses to be achieved and protected. Appropriate uses are identified by taking into consideration the use and value of the water body for public water supply, for protection of fish, shellfish, and wildlife, and for recreational, agricultural, industrial, and navigational purposes. In designating uses for a water body, States and Tribes examine the suitability of a water body for the uses based on the physical, chemical, and biological characteristics of the water body, its geographical setting and scenic qualities, and economic considerations. Each water body does not necessarily require a unique set of uses. Instead, the characteristics necessary to support a use can be identified so that water bodies having those characteristics can be grouped together as supporting particular uses. The Coral Reef Alliance (CORAL) the Tour Opperators' Iniative (TOI) and The Center for Environmental Leadership in Business (CELB). 2003. A Practical Guide to Good Practice: Managing Environmental Impacts In The Marine Recreation Sector.

Environmental Protection Agency. What are Water Quality Standards? Designated Uses. Water: Water Quality Standards Accessed 7/12/2011.

Contact Uses; Cultural Services; Decision Support; Designated Uses; Environmental Monitoring & Restoration; Food & Raw Materials; Marine Products; Physical & Chemical Water Quality Criteria; Political Pressure; Provisioning Services; Resource Use Management; Security & Public Administration Policies; Special Use Permitting; Tourism & Recreation; Tourism & Recreation Policies; Water Resources; Water Transportation
Resource Use Management: Marine Heritage Resource Protections This management option involves protecting underwater items/sites that have historical, cultural, archaeological, or paleontological significance. This response advocates permits for action that may degrade the resource. This can be accomplished through creating an MHR field unit, monitoring MHR site degradation, and evaluating excavation and mitigation techniques. Field units can help conduct field research and coordinated, permitted research activities. Experts relating to archaeological research underwater can also be hired with additional funding. Through evaluation of excavation techniques, new technologies can be suggested such as: turbidity screens, sediment removal equipment, and seagrass restoration/relocation protocols to lead to less disturbance. Inventory and decision tools can also be used in the aid of Maritime Heritage Resource protection. NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Civil Engineering & Construction; Construction Codes & Projects; Cultural Policies; Cultural Protections; Cultural Services; Decision Support; Designated Uses; Dredging Regulations; Dredging, Draining, & Filling; Ecosystem Services; Educational & Research Opportunities; Existence Value & Sense of Place; Mitigation; Physical Damage; Pipelines; Reef Life; Resource Use Management; Seagrasses; Security & Public Administration Policies; Special Use Permitting; Tourism & Recreation Policies; Utility Line Construction & Maintenance; Valuation; Wetlands
Restoration: Reintroduce Indigenous Living Corals The approach reviews the policies and regulation regarding the re-introduction of living corals indigenous to a specific geographic location that were propagated in the lab. The concern about reintroduction of organisms from the lab and aquaria revolves around the possibility of introducing exotic or foreign strains of diseases to natural coral. Also, there is concern about introducing defective genetic material as well. One viable solution may be to reintroduce corals reared in in-situ coral nurseries. NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Biological Addition; Biological Monitoring & Restoration; Biological Monitoring, Mapping, & Scientific Research; Coral; Decision Support; Ecosystem Monitoring & Restoration; Microorganisms; Reef Habitat; Security & Public Administration Policies; Special Use Permitting; Stony Coral; Wetland & Reef Restoration
Restoration: Acquire Blanket Permits for Restoration Programs Restoration programs often span multiple areas and multiple agencies. With proper collaboration between resource managers, and restoration programs, multiple programs/initiatives can work together under blanket permits from regulating agencies. For example, NOAA�s Beaufort Lab/Seagrass Research team, NOAA�s Damage Assessment Center, and DEP all coordinate restoration projects together in the Florida Keys National Marine Sanctuary. NOAA Marine Sanctuary Program. 2007. Florida Keys National Marine Sanctuary revised management plan. National Ocean Service, Key West, FL.

Biological Monitoring & Restoration; Collaboration & Partnering; Cultural Policies; Decision Support; Ecosystem Monitoring & Restoration; Environmental Monitoring & Restoration; Permitting & Zoning; Remediation; Resource Use Management; Security & Public Administration Policies; Special Use Permitting; Wetland & Reef Restoration

Laws

Legal Citation Purpose of Law Management Organization Database Topics
Archaeological Resources Protection Act of 1979 as amended, 16 United States Code § 470. To protect historic ruins, monuments, and objects of antiquity. Strenghtens and expands the protective provisions of the Antiquities Act of 1906 regarding archeological resources. It also revised the permitting process for conducting archeological research.

Application to Coral Reefs:

Legislative Actions:

Comments: 		National Park Service

Jurisdiction:
United States; US Territorial Waters; US Territories; Designated Marine Areas; US Virgin Islands 		Biological Monitoring & Restoration; Coastal Development; Cultural Policies; Ecosystem Monitoring & Restoration; Educational & Research Opportunities; Existence Value & Sense of Place; Public Administration; Recreational Opportunities; Resource Use Management; Responses; Special Use Permitting; Tourism & Recreation Policies
Bald and Golden Eagle Protection Act of 1940, as amended, 16 United States Code § 668. Protects Bald and Golden Eagles by prohibiting possession, sale or transport, alive or dead, or part, nest or egg, except as permitted by the Secretary of the Interior for scientific and exhibition purposes, or for religious purposes of Indians

Application to Coral Reefs:

Legislative Actions:Fines of $100,000 per incividual, or $200,000 for organizations, or one year in prison, or both, can be utilized.

Comments: 		US Fish and Wildlife Service

Jurisdiction:
United States 		Cultural Policies; Designate Protected Species; Political Pressure; Resource Use Management; Special Use Permitting
Exec. Order No. 13089, Coral Reef Protection, 63 Federal Register 32701 (1998). Protect coral reefs. Established the US Coral Reef Task Force

Application to Coral Reefs:The Task Force was assigned duties including developing and implementing research, in conjunction with the scientific community, to identify the major causes of coral reef degradation.

Legislative Actions:No penalties for noncompliance.

Comments: 		12 federal agencies, 7 states and territories, 3 freely associated states

Jurisdiction:
United States; US Territorial Waters; US Territories; US Virgin Islands; Puerto Rico 		Boating Regulations; Educational & Research Opportunities; Environmental Monitoring, Mapping, & Scientific Research; Existence Value & Sense of Place; Fishing & Harvesting Management; Hydrologic Management; Public Administration; Recreational Opportunities; Reef Life; Resource Use Management; Sectors Filling Human Needs; Special Use Permitting; Tourism & Recreation Policies

Jump to main content.